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Cluster: C65.bin_5_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C65_contig_188 C65_contig_188_1461 1632227 1633219 - 8.A.5.1.3
pfam C65_contig_188 C65_contig_188_1462 1633322 1634005 - DNA_alkylation
TF C65_contig_188 C65_contig_188_1463 1634050 1634871 - MerR
TC C65_contig_188 C65_contig_188_1464 1635053 1636144 + 2.A.103.1.3
TC C65_contig_188 C65_contig_188_1465 1636178 1638541 - 9.A.8.1.6
CAZyme C65_contig_188 C65_contig_188_1466 1638899 1640566 + GH13_31
Gene ID: C65_contig_188_1461
Type: TC
Location: 1632227 - 1633219 (-)
Gene ID: C65_contig_188_1462
Type: pfam
Location: 1633322 - 1634005 (-)
Gene ID: C65_contig_188_1463
Type: TF
Location: 1634050 - 1634871 (-)
Gene ID: C65_contig_188_1464
Type: TC
Location: 1635053 - 1636144 (+)
Gene ID: C65_contig_188_1465
Type: TC
Location: 1636178 - 1638541 (-)
Gene ID: C65_contig_188_1466
Type: CAZyme
Location: 1638899 - 1640566 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C65_contig_188_1463 vegan > omnivore 1.51082 0.01514
C65_contig_188_1464 vegan > omnivore 1.20290 0.01514

🧭 Explore Read Mapping of CGC

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