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Cluster: C65.bin_5_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C65_contig_188 C65_contig_188_947 1090380 1091414 - 4.D.2.1.5
pfam C65_contig_188 C65_contig_188_948 1091422 1092114 - PAP2_3
pfam C65_contig_188 C65_contig_188_949 1092213 1094444 - UvrD-helicase | AAA_19 | UvrD_C | PcrA_UvrD_tudor
CAZyme C65_contig_188 C65_contig_188_950 1094667 1096853 - GH36
TC C65_contig_188 C65_contig_188_951 1096890 1097738 - 3.A.1.1.28
TC C65_contig_188 C65_contig_188_952 1097738 1098607 - 3.A.1.1.28
TC C65_contig_188 C65_contig_188_953 1098604 1099896 - 3.A.1.1.28
Gene ID: C65_contig_188_947
Type: TC
Location: 1090380 - 1091414 (-)
Gene ID: C65_contig_188_948
Type: pfam
Location: 1091422 - 1092114 (-)
Gene ID: C65_contig_188_949
Type: pfam
Location: 1092213 - 1094444 (-)
Gene ID: C65_contig_188_950
Type: CAZyme
Location: 1094667 - 1096853 (-)
Gene ID: C65_contig_188_951
Type: TC
Location: 1096890 - 1097738 (-)
Gene ID: C65_contig_188_952
Type: TC
Location: 1097738 - 1098607 (-)
Gene ID: C65_contig_188_953
Type: TC
Location: 1098604 - 1099896 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C65_contig_188_947 vegan > omnivore 1.33586 0.01514
C65_contig_188_950 vegan > omnivore 1.21365 0.01514
C65_contig_188_953 vegan > omnivore 1.59235 0.01514

🧭 Explore Read Mapping of CGC

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