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Cluster: C65.bin_5_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C65_contig_188 C65_contig_188_733 842662 843978 + 2.A.66.1.33
pfam C65_contig_188 C65_contig_188_734 844172 845278 - OrfB_IS605 | Cas12f1-like_TNB | HTH_OrfB_IS605
TC C65_contig_188 C65_contig_188_735 845840 847294 - 2.A.40.2.1
TC C65_contig_188 C65_contig_188_736 847509 848678 - 2.A.4.7.4
pfam C65_contig_188 C65_contig_188_737 848841 849617 + NYN | OST-HTH
pfam C65_contig_188 C65_contig_188_738 849618 850076 - ThrE_2
TC C65_contig_188 C65_contig_188_739 850073 850837 - 2.A.79.1.5
pfam C65_contig_188 C65_contig_188_740 850966 852600 - Prismane
CAZyme C65_contig_188 C65_contig_188_741 852782 853888 - CE1
peptidase C65_contig_188 C65_contig_188_742 853915 854721 - S09.UPW
TF C65_contig_188 C65_contig_188_743 854750 855631 - HTH_AraC | HTH_AraC
CAZyme C65_contig_188 C65_contig_188_744 855705 856487 - CE1
TC C65_contig_188 C65_contig_188_745 856521 857885 - 2.A.2.3.3
Gene ID: C65_contig_188_733
Type: TC
Location: 842662 - 843978 (+)
Gene ID: C65_contig_188_734
Type: pfam
Location: 844172 - 845278 (-)
Gene ID: C65_contig_188_735
Type: TC
Location: 845840 - 847294 (-)
Gene ID: C65_contig_188_736
Type: TC
Location: 847509 - 848678 (-)
Gene ID: C65_contig_188_737
Type: pfam
Location: 848841 - 849617 (+)
Gene ID: C65_contig_188_738
Type: pfam
Location: 849618 - 850076 (-)
Gene ID: C65_contig_188_739
Type: TC
Location: 850073 - 850837 (-)
Gene ID: C65_contig_188_740
Type: pfam
Location: 850966 - 852600 (-)
Gene ID: C65_contig_188_741
Type: CAZyme
Location: 852782 - 853888 (-)
Gene ID: C65_contig_188_742
Type: peptidase
Location: 853915 - 854721 (-)
Gene ID: C65_contig_188_743
Type: TF
Location: 854750 - 855631 (-)
Gene ID: C65_contig_188_744
Type: CAZyme
Location: 855705 - 856487 (-)
Gene ID: C65_contig_188_745
Type: TC
Location: 856521 - 857885 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C65_contig_188_736 vegan > omnivore 1.10276 0.01514
C65_contig_188_737 vegan > omnivore 2.00976 0.01514
C65_contig_188_737 vegetarian > omnivore 1.08437 0.02319
C65_contig_188_738 vegan > omnivore 2.32517 0.01514
C65_contig_188_738 vegetarian > omnivore 1.45127 0.02319
C65_contig_188_739 vegan > omnivore 1.33372 0.01514

🧭 Explore Read Mapping of CGC

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