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Cluster: C65.bin_5_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C65_contig_188 C65_contig_188_460 542640 544907 + GT35
TC C65_contig_188 C65_contig_188_461 544968 546650 - 3.A.1.1.9
TC C65_contig_188 C65_contig_188_462 546640 548385 - 8.A.59.2.1
TF C65_contig_188 C65_contig_188_463 548327 549856 - HTH_AraC | HTH_AraC
TC C65_contig_188 C65_contig_188_464 549958 550794 - 3.A.1.1.45
TC C65_contig_188 C65_contig_188_465 550794 551648 - 3.A.1.1.45
TC C65_contig_188 C65_contig_188_466 551737 553011 - 3.A.1.1.45
Gene ID: C65_contig_188_460
Type: CAZyme
Location: 542640 - 544907 (+)
Gene ID: C65_contig_188_461
Type: TC
Location: 544968 - 546650 (-)
Gene ID: C65_contig_188_462
Type: TC
Location: 546640 - 548385 (-)
Gene ID: C65_contig_188_463
Type: TF
Location: 548327 - 549856 (-)
Gene ID: C65_contig_188_464
Type: TC
Location: 549958 - 550794 (-)
Gene ID: C65_contig_188_465
Type: TC
Location: 550794 - 551648 (-)
Gene ID: C65_contig_188_466
Type: TC
Location: 551737 - 553011 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C65_contig_188_461 vegan > omnivore 1.08390 0.01514
C65_contig_188_463 vegan > omnivore 1.00365 0.01514

🧭 Explore Read Mapping of CGC

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