dbCAN Logo

Cluster: C65.bin_5_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C65_contig_188 C65_contig_188_406 470446 471948 - 2.A.35.2.1
pfam C65_contig_188 C65_contig_188_407 471978 472919 - HTS
pfam C65_contig_188 C65_contig_188_408 472955 474913 - BRCT | DNA_ligase_aden | DNA_ligase_OB | PTCB-BRCT | HHH_2 | HHH_5
CAZyme C65_contig_188 C65_contig_188_409 475867 477075 + CE4
Gene ID: C65_contig_188_406
Type: TC
Location: 470446 - 471948 (-)
Gene ID: C65_contig_188_407
Type: pfam
Location: 471978 - 472919 (-)
Gene ID: C65_contig_188_408
Type: pfam
Location: 472955 - 474913 (-)
Gene ID: C65_contig_188_409
Type: CAZyme
Location: 475867 - 477075 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C65_contig_188_409 vegan > omnivore 2.27259 0.01514
C65_contig_188_409 vegetarian > omnivore 1.70496 0.02319

🧭 Explore Read Mapping of CGC

← Back to Cluster List