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Cluster: C65.bin_5_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C65_contig_188 C65_contig_188_136 163599 165470 - 3.D.1.5.1
TC C65_contig_188 C65_contig_188_137 165470 165952 - 3.D.1.5.1
STP C65_contig_188 C65_contig_188_138 166311 167816 + Fer4 | Fer4
NULL(UNKNOWN) C65_contig_188 C65_contig_188_139 167803 168270 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C65_contig_188 C65_contig_188_140 168271 169056 - GH73
Gene ID: C65_contig_188_136
Type: TC
Location: 163599 - 165470 (-)
Gene ID: C65_contig_188_137
Type: TC
Location: 165470 - 165952 (-)
Gene ID: C65_contig_188_138
Type: STP
Location: 166311 - 167816 (+)
Gene ID: C65_contig_188_139
Type:
Location: 167803 - 168270 (-)
Gene ID: C65_contig_188_140
Type: CAZyme
Location: 168271 - 169056 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C65_contig_188_139 vegan > omnivore 1.50631 0.01514
C65_contig_188_139 vegetarian > omnivore 1.52257 0.02319
C65_contig_188_140 vegan > omnivore 1.51938 0.01514
C65_contig_188_140 vegetarian > omnivore 2.44280 0.02319

🧭 Explore Read Mapping of CGC

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