Cluster: C65.bin_5_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: C65.bin_5
- CGC Family ID: CGCFAM_08034
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C65_contig_176 | C65_contig_176_335 | 345206 | 347719 | - | GH3 |
| STP | C65_contig_176 | C65_contig_176_336 | 347729 | 347962 | - | PTS-HPr |
| CAZyme | C65_contig_176 | C65_contig_176_337 | 348028 | 349596 | - | GH78 |
| TF | C65_contig_176 | C65_contig_176_338 | 349742 | 350794 | + | HTH_AraC | HTH_AraC |
| TC | C65_contig_176 | C65_contig_176_339 | 350918 | 352276 | + | 2.A.66.1.33 |
| CAZyme | C65_contig_176 | C65_contig_176_340 | 352295 | 354097 | - | GH2 |
| pfam | C65_contig_176 | C65_contig_176_341 | 354423 | 356027 | + | PEPCK_ATP |
| CAZyme | C65_contig_176 | C65_contig_176_342 | 356154 | 357923 | + | GH13_20 |
| STP | C65_contig_176 | C65_contig_176_343 | 358050 | 359534 | - | AAA |
| TC | C65_contig_176 | C65_contig_176_344 | 359575 | 361767 | - | 3.A.7.7.1 |
| TF | C65_contig_176 | C65_contig_176_345 | 361850 | 362515 | - | Trans_reg_C |
| pfam | C65_contig_176 | C65_contig_176_346 | 362674 | 363600 | + | DAGK_cat | YegS_C |
| CAZyme | C65_contig_176 | C65_contig_176_347 | 363676 | 364689 | - | GT2 |
Gene ID: C65_contig_176_335
Type: CAZyme
Location: 345206 - 347719 (-)
Type: CAZyme
Location: 345206 - 347719 (-)
Gene ID: C65_contig_176_336
Type: STP
Location: 347729 - 347962 (-)
Type: STP
Location: 347729 - 347962 (-)
Gene ID: C65_contig_176_337
Type: CAZyme
Location: 348028 - 349596 (-)
Type: CAZyme
Location: 348028 - 349596 (-)
Gene ID: C65_contig_176_338
Type: TF
Location: 349742 - 350794 (+)
Type: TF
Location: 349742 - 350794 (+)
Gene ID: C65_contig_176_339
Type: TC
Location: 350918 - 352276 (+)
Type: TC
Location: 350918 - 352276 (+)
Gene ID: C65_contig_176_340
Type: CAZyme
Location: 352295 - 354097 (-)
Type: CAZyme
Location: 352295 - 354097 (-)
Gene ID: C65_contig_176_341
Type: pfam
Location: 354423 - 356027 (+)
Type: pfam
Location: 354423 - 356027 (+)
Gene ID: C65_contig_176_342
Type: CAZyme
Location: 356154 - 357923 (+)
Type: CAZyme
Location: 356154 - 357923 (+)
Gene ID: C65_contig_176_343
Type: STP
Location: 358050 - 359534 (-)
Type: STP
Location: 358050 - 359534 (-)
Gene ID: C65_contig_176_344
Type: TC
Location: 359575 - 361767 (-)
Type: TC
Location: 359575 - 361767 (-)
Gene ID: C65_contig_176_345
Type: TF
Location: 361850 - 362515 (-)
Type: TF
Location: 361850 - 362515 (-)
Gene ID: C65_contig_176_346
Type: pfam
Location: 362674 - 363600 (+)
Type: pfam
Location: 362674 - 363600 (+)
Gene ID: C65_contig_176_347
Type: CAZyme
Location: 363676 - 364689 (-)
Type: CAZyme
Location: 363676 - 364689 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Blautia_A
Species
Blautia_A sp000436615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C65_contig_176_338 | vegan > omnivore | 1.74960 | 0.01514 |
| C65_contig_176_338 | vegetarian > omnivore | 1.27912 | 0.02319 |
| C65_contig_176_339 | vegan > omnivore | 1.92735 | 0.01514 |
| C65_contig_176_339 | vegetarian > omnivore | 1.33900 | 0.02319 |
| C65_contig_176_346 | vegan > omnivore | 2.05330 | 0.01514 |
| C65_contig_176_346 | vegetarian > omnivore | 1.13866 | 0.02319 |