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Cluster: C6.bin_3_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C6_contig_200 C6_contig_200_893 899653 901656 + 9.B.18.2.1
TC C6_contig_200 C6_contig_200_894 901688 902551 + 9.B.18.1.2
pfam C6_contig_200 C6_contig_200_895 902538 903602 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4
CAZyme C6_contig_200 C6_contig_200_896 903603 904793 + GT4
CAZyme C6_contig_200 C6_contig_200_897 904811 905608 + GT2
pfam C6_contig_200 C6_contig_200_898 905612 906256 + Hexapep
CAZyme C6_contig_200 C6_contig_200_899 906246 907340 + GT4
pfam C6_contig_200 C6_contig_200_900 907351 908100 + YdjC
CAZyme C6_contig_200 C6_contig_200_901 908100 909272 + GT4
NULL(UNKNOWN) C6_contig_200 C6_contig_200_902 909274 910503 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C6_contig_200 C6_contig_200_903 910481 911749 + GT4
NULL(UNKNOWN) C6_contig_200 C6_contig_200_904 911749 912681 + NULL(UNKNOWN)
[View Structural Homologs]
pfam C6_contig_200 C6_contig_200_905 912684 913586 + ATPgrasp_TupA
CAZyme C6_contig_200 C6_contig_200_906 913642 914730 + GT4
CAZyme C6_contig_200 C6_contig_200_907 914762 915811 + GT2
CAZyme C6_contig_200 C6_contig_200_908 915816 916895 + GT2
CAZyme C6_contig_200 C6_contig_200_909 916912 918060 + GT4
CAZyme C6_contig_200 C6_contig_200_910 918063 919139 + GT2
CAZyme C6_contig_200 C6_contig_200_911 919130 920146 + GT2
TC C6_contig_200 C6_contig_200_912 920165 921010 + 3.A.1.103.5
TC C6_contig_200 C6_contig_200_913 921027 922316 + 3.A.1.103.5
Gene ID: C6_contig_200_893
Type: TC
Location: 899653 - 901656 (+)
Gene ID: C6_contig_200_894
Type: TC
Location: 901688 - 902551 (+)
Gene ID: C6_contig_200_895
Type: pfam
Location: 902538 - 903602 (+)
Gene ID: C6_contig_200_896
Type: CAZyme
Location: 903603 - 904793 (+)
Gene ID: C6_contig_200_897
Type: CAZyme
Location: 904811 - 905608 (+)
Gene ID: C6_contig_200_898
Type: pfam
Location: 905612 - 906256 (+)
Gene ID: C6_contig_200_899
Type: CAZyme
Location: 906246 - 907340 (+)
Gene ID: C6_contig_200_900
Type: pfam
Location: 907351 - 908100 (+)
Gene ID: C6_contig_200_901
Type: CAZyme
Location: 908100 - 909272 (+)
Gene ID: C6_contig_200_902
Type:
Location: 909274 - 910503 (+)
Gene ID: C6_contig_200_903
Type: CAZyme
Location: 910481 - 911749 (+)
Gene ID: C6_contig_200_904
Type:
Location: 911749 - 912681 (+)
Gene ID: C6_contig_200_905
Type: pfam
Location: 912684 - 913586 (+)
Gene ID: C6_contig_200_906
Type: CAZyme
Location: 913642 - 914730 (+)
Gene ID: C6_contig_200_907
Type: CAZyme
Location: 914762 - 915811 (+)
Gene ID: C6_contig_200_908
Type: CAZyme
Location: 915816 - 916895 (+)
Gene ID: C6_contig_200_909
Type: CAZyme
Location: 916912 - 918060 (+)
Gene ID: C6_contig_200_910
Type: CAZyme
Location: 918063 - 919139 (+)
Gene ID: C6_contig_200_911
Type: CAZyme
Location: 919130 - 920146 (+)
Gene ID: C6_contig_200_912
Type: TC
Location: 920165 - 921010 (+)
Gene ID: C6_contig_200_913
Type: TC
Location: 921027 - 922316 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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