Cluster: C6.bin_3_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: C6.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C6_contig_195 | C6_contig_195_36 | 29573 | 32023 | + | 3.A.7.14.2 |
| NULL(UNKNOWN) | C6_contig_195 | C6_contig_195_37 | 32029 | 34161 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C6_contig_195 | C6_contig_195_38 | 34158 | 35162 | + | GH23 |
Gene ID: C6_contig_195_36
Type: TC
Location: 29573 - 32023 (+)
Type: TC
Location: 29573 - 32023 (+)
Gene ID: C6_contig_195_37
Type:
Location: 32029 - 34161 (+)
Type:
Location: 32029 - 34161 (+)
Gene ID: C6_contig_195_38
Type: CAZyme
Location: 34158 - 35162 (+)
Type: CAZyme
Location: 34158 - 35162 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea
Species
Dorea formicigenerans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C6_contig_195_37 | vegan > omnivore | 1.00875 | 0.02258 |
| C6_contig_195_38 | vegan > omnivore | 1.14821 | 0.02258 |