Cluster: C6.bin_3_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: C6.bin_3
- CGC Family ID: CGCFAM_00039
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C6_contig_615 | C6_contig_615_60 | 66808 | 68496 | + | GT2 |
| CAZyme | C6_contig_615 | C6_contig_615_61 | 68540 | 69520 | - | GT2 |
| TC | C6_contig_615 | C6_contig_615_62 | 69915 | 71171 | + | 9.B.18.1.1 |
| pfam | C6_contig_615 | C6_contig_615_63 | 71188 | 72321 | + | LytR_cpsA_psr |
| CAZyme | C6_contig_615 | C6_contig_615_64 | 72342 | 73259 | + | GT2 |
Gene ID: C6_contig_615_60
Type: CAZyme
Location: 66808 - 68496 (+)
Type: CAZyme
Location: 66808 - 68496 (+)
Gene ID: C6_contig_615_61
Type: CAZyme
Location: 68540 - 69520 (-)
Type: CAZyme
Location: 68540 - 69520 (-)
Gene ID: C6_contig_615_62
Type: TC
Location: 69915 - 71171 (+)
Type: TC
Location: 69915 - 71171 (+)
Gene ID: C6_contig_615_63
Type: pfam
Location: 71188 - 72321 (+)
Type: pfam
Location: 71188 - 72321 (+)
Gene ID: C6_contig_615_64
Type: CAZyme
Location: 72342 - 73259 (+)
Type: CAZyme
Location: 72342 - 73259 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea
Species
Dorea formicigenerans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.