Cluster: C6.bin_3_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C6.bin_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C6_contig_540 | C6_contig_540_13 | 11916 | 12923 | + | GH23 |
| pfam | C6_contig_540 | C6_contig_540_14 | 12938 | 13840 | + | TpcC |
| TF | C6_contig_540 | C6_contig_540_15 | 14010 | 14696 | + | Trans_reg_C |
| TC | C6_contig_540 | C6_contig_540_16 | 14798 | 15736 | + | 3.A.1.131.1 |
Gene ID: C6_contig_540_13
Type: CAZyme
Location: 11916 - 12923 (+)
Type: CAZyme
Location: 11916 - 12923 (+)
Gene ID: C6_contig_540_14
Type: pfam
Location: 12938 - 13840 (+)
Type: pfam
Location: 12938 - 13840 (+)
Gene ID: C6_contig_540_15
Type: TF
Location: 14010 - 14696 (+)
Type: TF
Location: 14010 - 14696 (+)
Gene ID: C6_contig_540_16
Type: TC
Location: 14798 - 15736 (+)
Type: TC
Location: 14798 - 15736 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea
Species
Dorea formicigenerans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.