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Cluster: C6.bin_3_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C6_contig_200 C6_contig_200_1904 2005689 2007467 + 8.A.59.2.1
STP C6_contig_200 C6_contig_200_1905 2007464 2008759 + SBP_bac_1
TC C6_contig_200 C6_contig_200_1906 2008882 2010180 + 3.A.1.1.45
TC C6_contig_200 C6_contig_200_1907 2010266 2011108 + 3.A.1.1.45
TC C6_contig_200 C6_contig_200_1908 2011109 2011948 + 3.A.1.1.45
CAZyme C6_contig_200 C6_contig_200_1909 2011978 2013486 + GH77
CAZyme C6_contig_200 C6_contig_200_1910 2013489 2015741 + GT35
Gene ID: C6_contig_200_1904
Type: TC
Location: 2005689 - 2007467 (+)
Gene ID: C6_contig_200_1905
Type: STP
Location: 2007464 - 2008759 (+)
Gene ID: C6_contig_200_1906
Type: TC
Location: 2008882 - 2010180 (+)
Gene ID: C6_contig_200_1907
Type: TC
Location: 2010266 - 2011108 (+)
Gene ID: C6_contig_200_1908
Type: TC
Location: 2011109 - 2011948 (+)
Gene ID: C6_contig_200_1909
Type: CAZyme
Location: 2011978 - 2013486 (+)
Gene ID: C6_contig_200_1910
Type: CAZyme
Location: 2013489 - 2015741 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C6_contig_200_1904 vegetarian > omnivore 1.14728 0.04130
C6_contig_200_1910 vegetarian > omnivore 1.00725 0.04130

🧭 Explore Read Mapping of CGC

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