Cluster: C6.bin_3_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: C6.bin_3
- CGC Family ID: CGCFAM_00210
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C6_contig_200 | C6_contig_200_1155 | 1167676 | 1168356 | + | 9.B.27.1.1 |
| pfam | C6_contig_200 | C6_contig_200_1156 | 1168346 | 1169311 | + | CCG | CCG | Fer4_8 |
| CAZyme | C6_contig_200 | C6_contig_200_1157 | 1169456 | 1170787 | + | GT2 |
Gene ID: C6_contig_200_1155
Type: TC
Location: 1167676 - 1168356 (+)
Type: TC
Location: 1167676 - 1168356 (+)
Gene ID: C6_contig_200_1156
Type: pfam
Location: 1168346 - 1169311 (+)
Type: pfam
Location: 1168346 - 1169311 (+)
Gene ID: C6_contig_200_1157
Type: CAZyme
Location: 1169456 - 1170787 (+)
Type: CAZyme
Location: 1169456 - 1170787 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea
Species
Dorea formicigenerans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C6_contig_200_1155 | vegan > omnivore | 1.75145 | 0.02258 |
| C6_contig_200_1155 | vegetarian > omnivore | 1.06890 | 0.04130 |
| C6_contig_200_1157 | vegetarian > omnivore | 1.18237 | 0.04130 |