Cluster: C6.bin_3_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: C6.bin_3
- CGC Family ID: CGCFAM_00008
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C6_contig_615 | C6_contig_615_49 | 51352 | 52584 | + | GT2 |
| CAZyme | C6_contig_615 | C6_contig_615_50 | 52615 | 54072 | + | GT4 |
| TC | C6_contig_615 | C6_contig_615_51 | 54216 | 54992 | + | 3.A.1.103.6 |
| TC | C6_contig_615 | C6_contig_615_52 | 55006 | 55731 | + | 3.A.1.103.1 |
| CAZyme | C6_contig_615 | C6_contig_615_53 | 55762 | 60189 | + | GH73 |
Gene ID: C6_contig_615_49
Type: CAZyme
Location: 51352 - 52584 (+)
Type: CAZyme
Location: 51352 - 52584 (+)
Gene ID: C6_contig_615_50
Type: CAZyme
Location: 52615 - 54072 (+)
Type: CAZyme
Location: 52615 - 54072 (+)
Gene ID: C6_contig_615_51
Type: TC
Location: 54216 - 54992 (+)
Type: TC
Location: 54216 - 54992 (+)
Gene ID: C6_contig_615_52
Type: TC
Location: 55006 - 55731 (+)
Type: TC
Location: 55006 - 55731 (+)
Gene ID: C6_contig_615_53
Type: CAZyme
Location: 55762 - 60189 (+)
Type: CAZyme
Location: 55762 - 60189 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea
Species
Dorea formicigenerans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.