Cluster: C59.bin_4_CGC3
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 8
- Substrate:
- Genome ID: C59.bin_4
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C59_contig_276 | C59_contig_276_263 | 293986 | 295002 | + | GT2 |
| TC | C59_contig_276 | C59_contig_276_264 | 295432 | 296466 | + | 2.A.28.2.4 |
| peptidase | C59_contig_276 | C59_contig_276_265 | 296534 | 298288 | + | S08.UPA |
| pfam | C59_contig_276 | C59_contig_276_266 | 298318 | 298545 | + | SfsA_N |
| CAZyme | C59_contig_276 | C59_contig_276_267 | 298752 | 301178 | + | GH3 |
| TF | C59_contig_276 | C59_contig_276_268 | 301170 | 302372 | - | HTH_AraC |
| CAZyme | C59_contig_276 | C59_contig_276_269 | 302538 | 304970 | + | GH148 |
| CAZyme | C59_contig_276 | C59_contig_276_270 | 305033 | 307369 | + | GH94 |
| pfam | C59_contig_276 | C59_contig_276_271 | 307461 | 308891 | + | MFS_1_like | MFS_2 |
| CAZyme | C59_contig_276 | C59_contig_276_272 | 308980 | 310656 | + | GH78 |
| NULL(UNKNOWN) | C59_contig_276 | C59_contig_276_273 | 310599 | 310868 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C59_contig_276 | C59_contig_276_274 | 310885 | 313344 | + | GH3 |
| CAZyme | C59_contig_276 | C59_contig_276_275 | 313416 | 315887 | + | GH3 |
| NULL(UNKNOWN) | C59_contig_276 | C59_contig_276_276 | 315943 | 316083 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C59_contig_276 | C59_contig_276_277 | 316102 | 316575 | + | GH35 |
Gene ID: C59_contig_276_263
Type: CAZyme
Location: 293986 - 295002 (+)
Type: CAZyme
Location: 293986 - 295002 (+)
Gene ID: C59_contig_276_264
Type: TC
Location: 295432 - 296466 (+)
Type: TC
Location: 295432 - 296466 (+)
Gene ID: C59_contig_276_265
Type: peptidase
Location: 296534 - 298288 (+)
Type: peptidase
Location: 296534 - 298288 (+)
Gene ID: C59_contig_276_266
Type: pfam
Location: 298318 - 298545 (+)
Type: pfam
Location: 298318 - 298545 (+)
Gene ID: C59_contig_276_267
Type: CAZyme
Location: 298752 - 301178 (+)
Type: CAZyme
Location: 298752 - 301178 (+)
Gene ID: C59_contig_276_268
Type: TF
Location: 301170 - 302372 (-)
Type: TF
Location: 301170 - 302372 (-)
Gene ID: C59_contig_276_269
Type: CAZyme
Location: 302538 - 304970 (+)
Type: CAZyme
Location: 302538 - 304970 (+)
Gene ID: C59_contig_276_270
Type: CAZyme
Location: 305033 - 307369 (+)
Type: CAZyme
Location: 305033 - 307369 (+)
Gene ID: C59_contig_276_271
Type: pfam
Location: 307461 - 308891 (+)
Type: pfam
Location: 307461 - 308891 (+)
Gene ID: C59_contig_276_272
Type: CAZyme
Location: 308980 - 310656 (+)
Type: CAZyme
Location: 308980 - 310656 (+)
Gene ID: C59_contig_276_273
Type:
Location: 310599 - 310868 (+)
Type:
Location: 310599 - 310868 (+)
Gene ID: C59_contig_276_274
Type: CAZyme
Location: 310885 - 313344 (+)
Type: CAZyme
Location: 310885 - 313344 (+)
Gene ID: C59_contig_276_275
Type: CAZyme
Location: 313416 - 315887 (+)
Type: CAZyme
Location: 313416 - 315887 (+)
Gene ID: C59_contig_276_276
Type:
Location: 315943 - 316083 (+)
Type:
Location: 315943 - 316083 (+)
Gene ID: C59_contig_276_277
Type: CAZyme
Location: 316102 - 316575 (+)
Type: CAZyme
Location: 316102 - 316575 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Bariatricus
Species
Bariatricus comes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C59_contig_276_274 | vegetarian > vegan | 1.10491 | 0.03067 |