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Cluster: C59.bin_4_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C59_contig_620 C59_contig_620_32 29058 30170 + 3.A.1.1.26
TC C59_contig_620 C59_contig_620_33 30473 33082 + 3.A.3.2.21
TC C59_contig_620 C59_contig_620_34 33154 34395 + 2.A.86.1.8
TC C59_contig_620 C59_contig_620_35 34726 35337 + 9.B.156.3.1
pfam C59_contig_620 C59_contig_620_36 35507 36502 + ABC_sub_bind
TC C59_contig_620 C59_contig_620_37 36527 37462 + 3.A.1.34.1
TC C59_contig_620 C59_contig_620_38 37462 38265 + 3.A.1.34.1
pfam C59_contig_620 C59_contig_620_39 39116 40510 + RVT_1 | GIIM
TC C59_contig_620 C59_contig_620_40 40709 42688 - 3.A.1.106.8
TC C59_contig_620 C59_contig_620_41 42685 44448 - 3.A.1.106.8
TC C59_contig_620 C59_contig_620_42 44652 46016 + 2.A.66.1.33
pfam C59_contig_620 C59_contig_620_43 46104 46628 + Gate
CAZyme C59_contig_620 C59_contig_620_44 46937 48925 + GH31_4
STP C59_contig_620 C59_contig_620_45 49021 50373 + SBP_bac_1
TC C59_contig_620 C59_contig_620_46 50481 51392 + 3.A.1.1.7
TC C59_contig_620 C59_contig_620_47 51408 52241 + 3.A.1.1.11
TC C59_contig_620 C59_contig_620_48 52249 53190 + 3.A.1.132.1
TC C59_contig_620 C59_contig_620_49 53190 53897 + 3.A.1.132.3
Gene ID: C59_contig_620_32
Type: TC
Location: 29058 - 30170 (+)
Gene ID: C59_contig_620_33
Type: TC
Location: 30473 - 33082 (+)
Gene ID: C59_contig_620_34
Type: TC
Location: 33154 - 34395 (+)
Gene ID: C59_contig_620_35
Type: TC
Location: 34726 - 35337 (+)
Gene ID: C59_contig_620_36
Type: pfam
Location: 35507 - 36502 (+)
Gene ID: C59_contig_620_37
Type: TC
Location: 36527 - 37462 (+)
Gene ID: C59_contig_620_38
Type: TC
Location: 37462 - 38265 (+)
Gene ID: C59_contig_620_39
Type: pfam
Location: 39116 - 40510 (+)
Gene ID: C59_contig_620_40
Type: TC
Location: 40709 - 42688 (-)
Gene ID: C59_contig_620_41
Type: TC
Location: 42685 - 44448 (-)
Gene ID: C59_contig_620_42
Type: TC
Location: 44652 - 46016 (+)
Gene ID: C59_contig_620_43
Type: pfam
Location: 46104 - 46628 (+)
Gene ID: C59_contig_620_44
Type: CAZyme
Location: 46937 - 48925 (+)
Gene ID: C59_contig_620_45
Type: STP
Location: 49021 - 50373 (+)
Gene ID: C59_contig_620_46
Type: TC
Location: 50481 - 51392 (+)
Gene ID: C59_contig_620_47
Type: TC
Location: 51408 - 52241 (+)
Gene ID: C59_contig_620_48
Type: TC
Location: 52249 - 53190 (+)
Gene ID: C59_contig_620_49
Type: TC
Location: 53190 - 53897 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C59_contig_620_43 vegetarian > vegan 1.19070 0.03067

🧭 Explore Read Mapping of CGC

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