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Cluster: C59.bin_4_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C59_contig_276 C59_contig_276_2076 2252416 2253321 - 2.A.7.3.52
CAZyme C59_contig_276 C59_contig_276_2077 2253344 2255656 - GH65
CAZyme C59_contig_276 C59_contig_276_2078 2255678 2258671 - GH2
TC C59_contig_276 C59_contig_276_2079 2258758 2259579 - 3.A.1.1.11
TC C59_contig_276 C59_contig_276_2080 2259579 2260514 - 3.A.1.1.23
Gene ID: C59_contig_276_2076
Type: TC
Location: 2252416 - 2253321 (-)
Gene ID: C59_contig_276_2077
Type: CAZyme
Location: 2253344 - 2255656 (-)
Gene ID: C59_contig_276_2078
Type: CAZyme
Location: 2255678 - 2258671 (-)
Gene ID: C59_contig_276_2079
Type: TC
Location: 2258758 - 2259579 (-)
Gene ID: C59_contig_276_2080
Type: TC
Location: 2259579 - 2260514 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C59_contig_276_2080 vegetarian > omnivore 1.75155 0.03103

🧭 Explore Read Mapping of CGC

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