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Cluster: C59.bin_4_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C59_contig_276 C59_contig_276_1928 2112258 2113724 - GH32
NULL(UNKNOWN) C59_contig_276 C59_contig_276_1929 2113738 2113989 - NULL(UNKNOWN)
[View Structural Homologs]
TC C59_contig_276 C59_contig_276_1930 2114050 2115684 - 2.A.58.2.2
pfam C59_contig_276 C59_contig_276_1931 2115833 2116189 - SpoVAC_SpoVAEB
TC C59_contig_276 C59_contig_276_1932 2116203 2117213 - 9.A.11.1.1
TC C59_contig_276 C59_contig_276_1933 2117230 2117688 - 9.A.11.1.1
pfam C59_contig_276 C59_contig_276_1934 2117701 2118117 - SpoVAB
TC C59_contig_276 C59_contig_276_1935 2118107 2118742 - 9.A.11.1.1
Gene ID: C59_contig_276_1928
Type: CAZyme
Location: 2112258 - 2113724 (-)
Gene ID: C59_contig_276_1929
Type:
Location: 2113738 - 2113989 (-)
Gene ID: C59_contig_276_1930
Type: TC
Location: 2114050 - 2115684 (-)
Gene ID: C59_contig_276_1931
Type: pfam
Location: 2115833 - 2116189 (-)
Gene ID: C59_contig_276_1932
Type: TC
Location: 2116203 - 2117213 (-)
Gene ID: C59_contig_276_1933
Type: TC
Location: 2117230 - 2117688 (-)
Gene ID: C59_contig_276_1934
Type: pfam
Location: 2117701 - 2118117 (-)
Gene ID: C59_contig_276_1935
Type: TC
Location: 2118107 - 2118742 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C59_contig_276_1933 vegetarian > vegan 1.37303 0.03334

🧭 Explore Read Mapping of CGC

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