Cluster: C59.bin_4_CGC14
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate: fructan
- Genome ID: C59.bin_4
- CGC Family ID: CGCFAM_00035
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C59_contig_276 | C59_contig_276_1842 | 2008571 | 2010391 | - | GH13_4 |
| CAZyme | C59_contig_276 | C59_contig_276_1843 | 2010496 | 2011980 | - | GH32 |
| NULL(UNKNOWN) | C59_contig_276 | C59_contig_276_1844 | 2012006 | 2013685 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C59_contig_276 | C59_contig_276_1845 | 2013707 | 2014603 | - | 3.A.1.1.29 |
| TC | C59_contig_276 | C59_contig_276_1846 | 2014620 | 2015558 | - | 3.A.1.1.10 |
| TF | C59_contig_276 | C59_contig_276_1847 | 2015784 | 2016809 | + | LacI |
| TC | C59_contig_276 | C59_contig_276_1848 | 2016942 | 2017292 | - | 2.A.115.2.14 |
| pfam | C59_contig_276 | C59_contig_276_1849 | 2017298 | 2017699 | - | MatE |
| peptidase | C59_contig_276 | C59_contig_276_1850 | 2017928 | 2019151 | + | M28.UPF |
| CAZyme | C59_contig_276 | C59_contig_276_1851 | 2019706 | 2020530 | + | CE4 |
Gene ID: C59_contig_276_1842
Type: CAZyme
Location: 2008571 - 2010391 (-)
Type: CAZyme
Location: 2008571 - 2010391 (-)
Gene ID: C59_contig_276_1843
Type: CAZyme
Location: 2010496 - 2011980 (-)
Type: CAZyme
Location: 2010496 - 2011980 (-)
Gene ID: C59_contig_276_1844
Type:
Location: 2012006 - 2013685 (-)
Type:
Location: 2012006 - 2013685 (-)
Gene ID: C59_contig_276_1845
Type: TC
Location: 2013707 - 2014603 (-)
Type: TC
Location: 2013707 - 2014603 (-)
Gene ID: C59_contig_276_1846
Type: TC
Location: 2014620 - 2015558 (-)
Type: TC
Location: 2014620 - 2015558 (-)
Gene ID: C59_contig_276_1847
Type: TF
Location: 2015784 - 2016809 (+)
Type: TF
Location: 2015784 - 2016809 (+)
Gene ID: C59_contig_276_1848
Type: TC
Location: 2016942 - 2017292 (-)
Type: TC
Location: 2016942 - 2017292 (-)
Gene ID: C59_contig_276_1849
Type: pfam
Location: 2017298 - 2017699 (-)
Type: pfam
Location: 2017298 - 2017699 (-)
Gene ID: C59_contig_276_1850
Type: peptidase
Location: 2017928 - 2019151 (+)
Type: peptidase
Location: 2017928 - 2019151 (+)
Gene ID: C59_contig_276_1851
Type: CAZyme
Location: 2019706 - 2020530 (+)
Type: CAZyme
Location: 2019706 - 2020530 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Bariatricus
Species
Bariatricus comes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.