Cluster: C59.bin_4_CGC12
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 5
- Substrate:
- Genome ID: C59.bin_4
- CGC Family ID: CGCFAM_05273
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C59_contig_276 | C59_contig_276_1595 | 1719417 | 1720751 | - | GT2 |
| STP | C59_contig_276 | C59_contig_276_1596 | 1720751 | 1721680 | - | Rhodanese | Rhodanese |
| pfam | C59_contig_276 | C59_contig_276_1597 | 1721695 | 1722993 | - | LytR_cpsA_psr |
| CAZyme | C59_contig_276 | C59_contig_276_1598 | 1722977 | 1723912 | - | GT2 |
| TC | C59_contig_276 | C59_contig_276_1599 | 1723909 | 1725237 | - | 9.B.18.1.1 |
| CAZyme | C59_contig_276 | C59_contig_276_1600 | 1725277 | 1727070 | - | GT2 | GT2 |
| CAZyme | C59_contig_276 | C59_contig_276_1601 | 1727074 | 1729530 | - | GT2 | GT2 |
| NULL(UNKNOWN) | C59_contig_276 | C59_contig_276_1602 | 1729555 | 1730136 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C59_contig_276 | C59_contig_276_1603 | 1730146 | 1730883 | - | 3.A.1.103.1 |
| TC | C59_contig_276 | C59_contig_276_1604 | 1730892 | 1731668 | - | 3.A.1.103.6 |
| CAZyme | C59_contig_276 | C59_contig_276_1605 | 1731808 | 1732488 | - | GT2 |
| pfam | C59_contig_276 | C59_contig_276_1606 | 1732491 | 1733378 | - | IU_nuc_hydro |
| TC | C59_contig_276 | C59_contig_276_1607 | 1733394 | 1734419 | - | 3.A.1.20.2 |
| pfam | C59_contig_276 | C59_contig_276_1608 | 1734433 | 1735242 | - | BPD_transp_1 |
| pfam | C59_contig_276 | C59_contig_276_1609 | 1735256 | 1736119 | - | BPD_transp_1 |
| TC | C59_contig_276 | C59_contig_276_1610 | 1736121 | 1737380 | - | 3.A.1.19.4 |
Gene ID: C59_contig_276_1595
Type: CAZyme
Location: 1719417 - 1720751 (-)
Type: CAZyme
Location: 1719417 - 1720751 (-)
Gene ID: C59_contig_276_1596
Type: STP
Location: 1720751 - 1721680 (-)
Type: STP
Location: 1720751 - 1721680 (-)
Gene ID: C59_contig_276_1597
Type: pfam
Location: 1721695 - 1722993 (-)
Type: pfam
Location: 1721695 - 1722993 (-)
Gene ID: C59_contig_276_1598
Type: CAZyme
Location: 1722977 - 1723912 (-)
Type: CAZyme
Location: 1722977 - 1723912 (-)
Gene ID: C59_contig_276_1599
Type: TC
Location: 1723909 - 1725237 (-)
Type: TC
Location: 1723909 - 1725237 (-)
Gene ID: C59_contig_276_1600
Type: CAZyme
Location: 1725277 - 1727070 (-)
Type: CAZyme
Location: 1725277 - 1727070 (-)
Gene ID: C59_contig_276_1601
Type: CAZyme
Location: 1727074 - 1729530 (-)
Type: CAZyme
Location: 1727074 - 1729530 (-)
Gene ID: C59_contig_276_1602
Type:
Location: 1729555 - 1730136 (-)
Type:
Location: 1729555 - 1730136 (-)
Gene ID: C59_contig_276_1603
Type: TC
Location: 1730146 - 1730883 (-)
Type: TC
Location: 1730146 - 1730883 (-)
Gene ID: C59_contig_276_1604
Type: TC
Location: 1730892 - 1731668 (-)
Type: TC
Location: 1730892 - 1731668 (-)
Gene ID: C59_contig_276_1605
Type: CAZyme
Location: 1731808 - 1732488 (-)
Type: CAZyme
Location: 1731808 - 1732488 (-)
Gene ID: C59_contig_276_1606
Type: pfam
Location: 1732491 - 1733378 (-)
Type: pfam
Location: 1732491 - 1733378 (-)
Gene ID: C59_contig_276_1607
Type: TC
Location: 1733394 - 1734419 (-)
Type: TC
Location: 1733394 - 1734419 (-)
Gene ID: C59_contig_276_1608
Type: pfam
Location: 1734433 - 1735242 (-)
Type: pfam
Location: 1734433 - 1735242 (-)
Gene ID: C59_contig_276_1609
Type: pfam
Location: 1735256 - 1736119 (-)
Type: pfam
Location: 1735256 - 1736119 (-)
Gene ID: C59_contig_276_1610
Type: TC
Location: 1736121 - 1737380 (-)
Type: TC
Location: 1736121 - 1737380 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Bariatricus
Species
Bariatricus comes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C59_contig_276_1596 | vegetarian > vegan | 1.32653 | 0.03067 |
| C59_contig_276_1598 | vegetarian > omnivore | 1.18464 | 0.03103 |
| C59_contig_276_1606 | vegan > omnivore | 2.27863 | 0.00893 |