dbCAN Logo

Cluster: C58.bin_5_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C58_contig_192 C58_contig_192_426 478439 479260 + GT2
CAZyme C58_contig_192 C58_contig_192_427 479296 480261 + GT2
CAZyme C58_contig_192 C58_contig_192_428 480295 480987 + GT2
pfam C58_contig_192 C58_contig_192_429 481003 481362 + DUF2304
pfam C58_contig_192 C58_contig_192_430 481614 482168 + dTDP_sugar_isom
TC C58_contig_192 C58_contig_192_431 482211 483026 + 3.A.1.104.1
TC C58_contig_192 C58_contig_192_432 483091 484305 - 2.A.27.1.3
NULL(UNKNOWN) C58_contig_192 C58_contig_192_433 484497 484745 + NULL(UNKNOWN)
[View Structural Homologs]
TC C58_contig_192 C58_contig_192_434 484742 486376 + 3.A.1.5.38
TC C58_contig_192 C58_contig_192_435 486398 488371 + 3.A.1.5.20
TC C58_contig_192 C58_contig_192_436 488402 489271 + 3.A.1.5.23
TC C58_contig_192 C58_contig_192_437 489261 489860 + 3.A.1.5.3
Gene ID: C58_contig_192_426
Type: CAZyme
Location: 478439 - 479260 (+)
Gene ID: C58_contig_192_427
Type: CAZyme
Location: 479296 - 480261 (+)
Gene ID: C58_contig_192_428
Type: CAZyme
Location: 480295 - 480987 (+)
Gene ID: C58_contig_192_429
Type: pfam
Location: 481003 - 481362 (+)
Gene ID: C58_contig_192_430
Type: pfam
Location: 481614 - 482168 (+)
Gene ID: C58_contig_192_431
Type: TC
Location: 482211 - 483026 (+)
Gene ID: C58_contig_192_432
Type: TC
Location: 483091 - 484305 (-)
Gene ID: C58_contig_192_433
Type:
Location: 484497 - 484745 (+)
Gene ID: C58_contig_192_434
Type: TC
Location: 484742 - 486376 (+)
Gene ID: C58_contig_192_435
Type: TC
Location: 486398 - 488371 (+)
Gene ID: C58_contig_192_436
Type: TC
Location: 488402 - 489271 (+)
Gene ID: C58_contig_192_437
Type: TC
Location: 489261 - 489860 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List