Cluster: C58.bin_5_CGC20
🧬 Cluster Details
- Gene Count: 28
- CAZyme Count: 2
- Substrate:
- Genome ID: C58.bin_5
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C58_contig_12 | C58_contig_12_1202 | 1308002 | 1309348 | - | 2.A.66.1.33 |
| TC | C58_contig_12 | C58_contig_12_1203 | 1309478 | 1310461 | - | 3.A.1.5.15 |
| TC | C58_contig_12 | C58_contig_12_1204 | 1310454 | 1311431 | - | 3.A.1.5.1 |
| TC | C58_contig_12 | C58_contig_12_1205 | 1311445 | 1312317 | - | 3.A.1.5.20 |
| TC | C58_contig_12 | C58_contig_12_1206 | 1312362 | 1313333 | - | 3.A.1.5.20 |
| TC | C58_contig_12 | C58_contig_12_1207 | 1313352 | 1315061 | - | 3.A.1.5.20 |
| pfam | C58_contig_12 | C58_contig_12_1208 | 1315174 | 1315992 | - | DUF169 |
| pfam | C58_contig_12 | C58_contig_12_1209 | 1316258 | 1317127 | - | CN_hydrolase |
| TC | C58_contig_12 | C58_contig_12_1210 | 1317204 | 1318004 | - | 3.A.1.17.4 |
| TC | C58_contig_12 | C58_contig_12_1211 | 1317997 | 1318776 | - | 3.A.1.17.8 |
| TC | C58_contig_12 | C58_contig_12_1212 | 1318883 | 1320196 | - | 3.A.1.121.4 |
| NULL(UNKNOWN) | C58_contig_12 | C58_contig_12_1213 | 1320331 | 1320708 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C58_contig_12 | C58_contig_12_1214 | 1320698 | 1322239 | + | Sulfatase |
| TC | C58_contig_12 | C58_contig_12_1215 | 1322371 | 1323552 | + | 2.A.27.1.1 |
| pfam | C58_contig_12 | C58_contig_12_1216 | 1323800 | 1324510 | + | DUF5714 |
| pfam | C58_contig_12 | C58_contig_12_1217 | 1324558 | 1325016 | - | DUF212 |
| CAZyme | C58_contig_12 | C58_contig_12_1218 | 1325047 | 1326492 | - | GT5 |
| STP | C58_contig_12 | C58_contig_12_1219 | 1326612 | 1327418 | - | Response_reg | Spo0A_C |
| CAZyme | C58_contig_12 | C58_contig_12_1220 | 1327486 | 1328475 | - | CE4 |
| NULL(UNKNOWN) | C58_contig_12 | C58_contig_12_1221 | 1328559 | 1329110 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C58_contig_12 | C58_contig_12_1222 | 1329390 | 1330886 | - | 2.A.80.1.1 |
| pfam | C58_contig_12 | C58_contig_12_1223 | 1330913 | 1331347 | - | TctB |
| TC | C58_contig_12 | C58_contig_12_1224 | 1331378 | 1332406 | - | 2.A.80.1.3 |
| STP | C58_contig_12 | C58_contig_12_1225 | 1332444 | 1333007 | - | HD |
| TC | C58_contig_12 | C58_contig_12_1226 | 1333200 | 1334597 | - | 2.A.40.2.1 |
| pfam | C58_contig_12 | C58_contig_12_1227 | 1334807 | 1335640 | - | AP_endonuc_2 |
| TC | C58_contig_12 | C58_contig_12_1228 | 1335707 | 1336645 | - | 3.A.1.132.7 |
| TC | C58_contig_12 | C58_contig_12_1229 | 1336623 | 1337585 | - | 3.A.1.131.3 |
Gene ID: C58_contig_12_1202
Type: TC
Location: 1308002 - 1309348 (-)
Type: TC
Location: 1308002 - 1309348 (-)
Gene ID: C58_contig_12_1203
Type: TC
Location: 1309478 - 1310461 (-)
Type: TC
Location: 1309478 - 1310461 (-)
Gene ID: C58_contig_12_1204
Type: TC
Location: 1310454 - 1311431 (-)
Type: TC
Location: 1310454 - 1311431 (-)
Gene ID: C58_contig_12_1205
Type: TC
Location: 1311445 - 1312317 (-)
Type: TC
Location: 1311445 - 1312317 (-)
Gene ID: C58_contig_12_1206
Type: TC
Location: 1312362 - 1313333 (-)
Type: TC
Location: 1312362 - 1313333 (-)
Gene ID: C58_contig_12_1207
Type: TC
Location: 1313352 - 1315061 (-)
Type: TC
Location: 1313352 - 1315061 (-)
Gene ID: C58_contig_12_1208
Type: pfam
Location: 1315174 - 1315992 (-)
Type: pfam
Location: 1315174 - 1315992 (-)
Gene ID: C58_contig_12_1209
Type: pfam
Location: 1316258 - 1317127 (-)
Type: pfam
Location: 1316258 - 1317127 (-)
Gene ID: C58_contig_12_1210
Type: TC
Location: 1317204 - 1318004 (-)
Type: TC
Location: 1317204 - 1318004 (-)
Gene ID: C58_contig_12_1211
Type: TC
Location: 1317997 - 1318776 (-)
Type: TC
Location: 1317997 - 1318776 (-)
Gene ID: C58_contig_12_1212
Type: TC
Location: 1318883 - 1320196 (-)
Type: TC
Location: 1318883 - 1320196 (-)
Gene ID: C58_contig_12_1213
Type:
Location: 1320331 - 1320708 (+)
Type:
Location: 1320331 - 1320708 (+)
Gene ID: C58_contig_12_1214
Type: pfam
Location: 1320698 - 1322239 (+)
Type: pfam
Location: 1320698 - 1322239 (+)
Gene ID: C58_contig_12_1215
Type: TC
Location: 1322371 - 1323552 (+)
Type: TC
Location: 1322371 - 1323552 (+)
Gene ID: C58_contig_12_1216
Type: pfam
Location: 1323800 - 1324510 (+)
Type: pfam
Location: 1323800 - 1324510 (+)
Gene ID: C58_contig_12_1217
Type: pfam
Location: 1324558 - 1325016 (-)
Type: pfam
Location: 1324558 - 1325016 (-)
Gene ID: C58_contig_12_1218
Type: CAZyme
Location: 1325047 - 1326492 (-)
Type: CAZyme
Location: 1325047 - 1326492 (-)
Gene ID: C58_contig_12_1219
Type: STP
Location: 1326612 - 1327418 (-)
Type: STP
Location: 1326612 - 1327418 (-)
Gene ID: C58_contig_12_1220
Type: CAZyme
Location: 1327486 - 1328475 (-)
Type: CAZyme
Location: 1327486 - 1328475 (-)
Gene ID: C58_contig_12_1221
Type:
Location: 1328559 - 1329110 (-)
Type:
Location: 1328559 - 1329110 (-)
Gene ID: C58_contig_12_1222
Type: TC
Location: 1329390 - 1330886 (-)
Type: TC
Location: 1329390 - 1330886 (-)
Gene ID: C58_contig_12_1223
Type: pfam
Location: 1330913 - 1331347 (-)
Type: pfam
Location: 1330913 - 1331347 (-)
Gene ID: C58_contig_12_1224
Type: TC
Location: 1331378 - 1332406 (-)
Type: TC
Location: 1331378 - 1332406 (-)
Gene ID: C58_contig_12_1225
Type: STP
Location: 1332444 - 1333007 (-)
Type: STP
Location: 1332444 - 1333007 (-)
Gene ID: C58_contig_12_1226
Type: TC
Location: 1333200 - 1334597 (-)
Type: TC
Location: 1333200 - 1334597 (-)
Gene ID: C58_contig_12_1227
Type: pfam
Location: 1334807 - 1335640 (-)
Type: pfam
Location: 1334807 - 1335640 (-)
Gene ID: C58_contig_12_1228
Type: TC
Location: 1335707 - 1336645 (-)
Type: TC
Location: 1335707 - 1336645 (-)
Gene ID: C58_contig_12_1229
Type: TC
Location: 1336623 - 1337585 (-)
Type: TC
Location: 1336623 - 1337585 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp000435655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.