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Cluster: C58.bin_5_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C58_contig_12 C58_contig_12_406 450106 452556 - GT35
pfam C58_contig_12 C58_contig_12_407 452640 455777 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
pfam C58_contig_12 C58_contig_12_408 456173 456799 - Flg_new | Flg_new | Flg_new_2
TC C58_contig_12 C58_contig_12_409 456940 458010 - 3.A.1.2.3
TC C58_contig_12 C58_contig_12_410 458027 459523 - 3.A.1.2.3
STP C58_contig_12 C58_contig_12_411 459772 461028 - Peripla_BP_1
TC C58_contig_12 C58_contig_12_412 461219 462196 - 3.A.1.2.11
TC C58_contig_12 C58_contig_12_413 462183 463910 - 8.A.59.2.1
Gene ID: C58_contig_12_406
Type: CAZyme
Location: 450106 - 452556 (-)
Gene ID: C58_contig_12_407
Type: pfam
Location: 452640 - 455777 (-)
Gene ID: C58_contig_12_408
Type: pfam
Location: 456173 - 456799 (-)
Gene ID: C58_contig_12_409
Type: TC
Location: 456940 - 458010 (-)
Gene ID: C58_contig_12_410
Type: TC
Location: 458027 - 459523 (-)
Gene ID: C58_contig_12_411
Type: STP
Location: 459772 - 461028 (-)
Gene ID: C58_contig_12_412
Type: TC
Location: 461219 - 462196 (-)
Gene ID: C58_contig_12_413
Type: TC
Location: 462183 - 463910 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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