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Cluster: C58.bin_5_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C58_contig_12 C58_contig_12_61 65949 66764 - 3.A.1.1.34
TC C58_contig_12 C58_contig_12_62 66766 67629 - 3.A.1.1.4
TC C58_contig_12 C58_contig_12_63 67660 68952 - 3.A.1.1.4
CAZyme C58_contig_12 C58_contig_12_64 69206 72211 + GH2
TF C58_contig_12 C58_contig_12_65 72252 73259 + LacI
TC C58_contig_12 C58_contig_12_66 73370 74482 + 3.A.1.1.26
pfam C58_contig_12 C58_contig_12_67 74515 75747 + HTH_30 | GGDEF_2
TC C58_contig_12 C58_contig_12_68 75728 76426 + 9.B.28.1.2
Gene ID: C58_contig_12_61
Type: TC
Location: 65949 - 66764 (-)
Gene ID: C58_contig_12_62
Type: TC
Location: 66766 - 67629 (-)
Gene ID: C58_contig_12_63
Type: TC
Location: 67660 - 68952 (-)
Gene ID: C58_contig_12_64
Type: CAZyme
Location: 69206 - 72211 (+)
Gene ID: C58_contig_12_65
Type: TF
Location: 72252 - 73259 (+)
Gene ID: C58_contig_12_66
Type: TC
Location: 73370 - 74482 (+)
Gene ID: C58_contig_12_67
Type: pfam
Location: 74515 - 75747 (+)
Gene ID: C58_contig_12_68
Type: TC
Location: 75728 - 76426 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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