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Cluster: C58.bin_4_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C58_contig_219 C58_contig_219_43 50418 51779 + 9.B.18.1.3
pfam C58_contig_219 C58_contig_219_44 51779 52879 + Amino_oxidase | GLF | NAD_binding_8
CAZyme C58_contig_219 C58_contig_219_45 52892 53956 + GT2
CAZyme C58_contig_219 C58_contig_219_46 53956 55014 + GT2
pfam C58_contig_219 C58_contig_219_47 55027 56163 + Glyphos_transf
NULL(UNKNOWN) C58_contig_219 C58_contig_219_48 56174 57436 + NULL(UNKNOWN)
[View Structural Homologs]
TC C58_contig_219 C58_contig_219_49 57471 58532 + 9.B.183.1.9
NULL(UNKNOWN) C58_contig_219 C58_contig_219_50 58542 59960 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C58_contig_219 C58_contig_219_51 59990 61063 + GT2
CAZyme C58_contig_219 C58_contig_219_52 61087 62013 + GT2
Gene ID: C58_contig_219_43
Type: TC
Location: 50418 - 51779 (+)
Gene ID: C58_contig_219_44
Type: pfam
Location: 51779 - 52879 (+)
Gene ID: C58_contig_219_45
Type: CAZyme
Location: 52892 - 53956 (+)
Gene ID: C58_contig_219_46
Type: CAZyme
Location: 53956 - 55014 (+)
Gene ID: C58_contig_219_47
Type: pfam
Location: 55027 - 56163 (+)
Gene ID: C58_contig_219_48
Type:
Location: 56174 - 57436 (+)
Gene ID: C58_contig_219_49
Type: TC
Location: 57471 - 58532 (+)
Gene ID: C58_contig_219_50
Type:
Location: 58542 - 59960 (+)
Gene ID: C58_contig_219_51
Type: CAZyme
Location: 59990 - 61063 (+)
Gene ID: C58_contig_219_52
Type: CAZyme
Location: 61087 - 62013 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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