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Cluster: C58.bin_4_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C58_contig_100 C58_contig_100_114 133901 135784 + GH129
CAZyme C58_contig_100 C58_contig_100_115 135800 137107 + GH177
TC C58_contig_100 C58_contig_100_116 137212 138495 + 3.A.1.1.44
TC C58_contig_100 C58_contig_100_117 138510 139439 + 3.A.1.1.11
TC C58_contig_100 C58_contig_100_118 139457 140284 + 3.A.1.1.36
pfam C58_contig_100 C58_contig_100_119 140431 141222 + ABC2_membrane_6
pfam C58_contig_100 C58_contig_100_120 141226 142020 + ABC2_membrane_6
TC C58_contig_100 C58_contig_100_121 142035 143030 + 3.A.1.141.1
CAZyme C58_contig_100 C58_contig_100_122 143035 147099 + GH31_18
TC C58_contig_100 C58_contig_100_123 147378 148031 - 9.B.28.1.2
Gene ID: C58_contig_100_114
Type: CAZyme
Location: 133901 - 135784 (+)
Gene ID: C58_contig_100_115
Type: CAZyme
Location: 135800 - 137107 (+)
Gene ID: C58_contig_100_116
Type: TC
Location: 137212 - 138495 (+)
Gene ID: C58_contig_100_117
Type: TC
Location: 138510 - 139439 (+)
Gene ID: C58_contig_100_118
Type: TC
Location: 139457 - 140284 (+)
Gene ID: C58_contig_100_119
Type: pfam
Location: 140431 - 141222 (+)
Gene ID: C58_contig_100_120
Type: pfam
Location: 141226 - 142020 (+)
Gene ID: C58_contig_100_121
Type: TC
Location: 142035 - 143030 (+)
Gene ID: C58_contig_100_122
Type: CAZyme
Location: 143035 - 147099 (+)
Gene ID: C58_contig_100_123
Type: TC
Location: 147378 - 148031 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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