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Cluster: C58.bin_4_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C58_contig_93 C58_contig_93_226 234644 236134 + 2.A.3.7.5
pfam C58_contig_93 C58_contig_93_227 236342 239566 + MGS | ATP-grasp | ATP-grasp | CPSase_L_D2 | CPSase_L_D2 | CPSase_L_D3 | Dala_Dala_lig_C
TC C58_contig_93 C58_contig_93_228 239588 241345 - 8.A.59.2.1
TF C58_contig_93 C58_contig_93_229 241350 242867 - HTH_AraC
TC C58_contig_93 C58_contig_93_230 243127 244428 + 3.A.1.1.4
TC C58_contig_93 C58_contig_93_231 244478 245365 + 3.A.1.1.4
TC C58_contig_93 C58_contig_93_232 245358 246200 + 3.A.1.1.4
CAZyme C58_contig_93 C58_contig_93_233 246232 249267 + GH2
Gene ID: C58_contig_93_226
Type: TC
Location: 234644 - 236134 (+)
Gene ID: C58_contig_93_227
Type: pfam
Location: 236342 - 239566 (+)
Gene ID: C58_contig_93_228
Type: TC
Location: 239588 - 241345 (-)
Gene ID: C58_contig_93_229
Type: TF
Location: 241350 - 242867 (-)
Gene ID: C58_contig_93_230
Type: TC
Location: 243127 - 244428 (+)
Gene ID: C58_contig_93_231
Type: TC
Location: 244478 - 245365 (+)
Gene ID: C58_contig_93_232
Type: TC
Location: 245358 - 246200 (+)
Gene ID: C58_contig_93_233
Type: CAZyme
Location: 246232 - 249267 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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