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Cluster: C58.bin_4_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C58_contig_93 C58_contig_93_64 60619 62535 - GH13_9
NULL(UNKNOWN) C58_contig_93 C58_contig_93_65 62656 65286 - NULL(UNKNOWN)
[View Structural Homologs]
TC C58_contig_93 C58_contig_93_66 66168 66719 + 3.A.1.25.5
pfam C58_contig_93 C58_contig_93_67 67210 68973 + DUF885
pfam C58_contig_93 C58_contig_93_68 69051 69578 - Gate
TC C58_contig_93 C58_contig_93_69 69650 70999 - 2.A.66.1.33
TC C58_contig_93 C58_contig_93_70 71027 71710 - 9.B.143.2.3
pfam C58_contig_93 C58_contig_93_71 71803 72375 - Fumerase_C
pfam C58_contig_93 C58_contig_93_72 72376 73218 - Fumerase
TC C58_contig_93 C58_contig_93_73 73256 74866 - 3.D.10.1.1
Gene ID: C58_contig_93_64
Type: CAZyme
Location: 60619 - 62535 (-)
Gene ID: C58_contig_93_65
Type:
Location: 62656 - 65286 (-)
Gene ID: C58_contig_93_66
Type: TC
Location: 66168 - 66719 (+)
Gene ID: C58_contig_93_67
Type: pfam
Location: 67210 - 68973 (+)
Gene ID: C58_contig_93_68
Type: pfam
Location: 69051 - 69578 (-)
Gene ID: C58_contig_93_69
Type: TC
Location: 69650 - 70999 (-)
Gene ID: C58_contig_93_70
Type: TC
Location: 71027 - 71710 (-)
Gene ID: C58_contig_93_71
Type: pfam
Location: 71803 - 72375 (-)
Gene ID: C58_contig_93_72
Type: pfam
Location: 72376 - 73218 (-)
Gene ID: C58_contig_93_73
Type: TC
Location: 73256 - 74866 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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