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Cluster: C58.bin_2_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C58_contig_269 C58_contig_269_739 778205 779041 - 4.A.6.1.17
TC C58_contig_269 C58_contig_269_740 779047 779796 - 4.A.6.1.4
TC C58_contig_269 C58_contig_269_741 779796 780281 - 4.A.6.1.9
TC C58_contig_269 C58_contig_269_742 780298 780681 - 4.A.6.1.10
CAZyme C58_contig_269 C58_contig_269_743 781010 782866 - CBM48 | GH13_9
pfam C58_contig_269 C58_contig_269_744 783192 783533 - Cupin_2
CAZyme C58_contig_269 C58_contig_269_745 783648 785093 - GH1
NULL(UNKNOWN) C58_contig_269 C58_contig_269_746 785090 785731 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C58_contig_269 C58_contig_269_747 785735 787171 - GH1
TC C58_contig_269 C58_contig_269_748 787184 787522 - 4.A.3.2.3
TC C58_contig_269 C58_contig_269_749 787545 788786 - 4.A.3.2.6
Gene ID: C58_contig_269_739
Type: TC
Location: 778205 - 779041 (-)
Gene ID: C58_contig_269_740
Type: TC
Location: 779047 - 779796 (-)
Gene ID: C58_contig_269_741
Type: TC
Location: 779796 - 780281 (-)
Gene ID: C58_contig_269_742
Type: TC
Location: 780298 - 780681 (-)
Gene ID: C58_contig_269_743
Type: CAZyme
Location: 781010 - 782866 (-)
Gene ID: C58_contig_269_744
Type: pfam
Location: 783192 - 783533 (-)
Gene ID: C58_contig_269_745
Type: CAZyme
Location: 783648 - 785093 (-)
Gene ID: C58_contig_269_746
Type:
Location: 785090 - 785731 (-)
Gene ID: C58_contig_269_747
Type: CAZyme
Location: 785735 - 787171 (-)
Gene ID: C58_contig_269_748
Type: TC
Location: 787184 - 787522 (-)
Gene ID: C58_contig_269_749
Type: TC
Location: 787545 - 788786 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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