dbCAN Logo

Cluster: C58.bin_2_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C58_contig_39 C58_contig_39_1066 1053075 1054706 - GH13_31
TC C58_contig_39 C58_contig_39_1067 1054687 1055829 - 4.A.1.2.13
TC C58_contig_39 C58_contig_39_1068 1055896 1056123 - 4.A.1.2.13
NULL(UNKNOWN) C58_contig_39 C58_contig_39_1069 1056323 1056655 - NULL(UNKNOWN)
[View Structural Homologs]
TF C58_contig_39 C58_contig_39_1070 1056658 1057356 - GntR
TC C58_contig_39 C58_contig_39_1071 1057584 1058519 + 3.A.1.105.3
TC C58_contig_39 C58_contig_39_1072 1058506 1059408 + 3.A.1.130.1
TF C58_contig_39 C58_contig_39_1073 1059418 1059858 + LytTR
pfam C58_contig_39 C58_contig_39_1074 1059868 1060296 + DUF3021
TC C58_contig_39 C58_contig_39_1075 1060326 1062137 - 2.A.16.2.2
Gene ID: C58_contig_39_1066
Type: CAZyme
Location: 1053075 - 1054706 (-)
Gene ID: C58_contig_39_1067
Type: TC
Location: 1054687 - 1055829 (-)
Gene ID: C58_contig_39_1068
Type: TC
Location: 1055896 - 1056123 (-)
Gene ID: C58_contig_39_1069
Type:
Location: 1056323 - 1056655 (-)
Gene ID: C58_contig_39_1070
Type: TF
Location: 1056658 - 1057356 (-)
Gene ID: C58_contig_39_1071
Type: TC
Location: 1057584 - 1058519 (+)
Gene ID: C58_contig_39_1072
Type: TC
Location: 1058506 - 1059408 (+)
Gene ID: C58_contig_39_1073
Type: TF
Location: 1059418 - 1059858 (+)
Gene ID: C58_contig_39_1074
Type: pfam
Location: 1059868 - 1060296 (+)
Gene ID: C58_contig_39_1075
Type: TC
Location: 1060326 - 1062137 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List