Cluster: C58.bin_1_CGC33
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: C58.bin_1
- CGC Family ID: CGCFAM_05266
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C58_contig_197 | C58_contig_197_3322 | 3492162 | 3492605 | - | 4.A.2.1.10 |
| TC | C58_contig_197 | C58_contig_197_3323 | 3492609 | 3493646 | - | 4.A.2.1.7 |
| TC | C58_contig_197 | C58_contig_197_3324 | 3493667 | 3493981 | - | 4.A.2.1.6 |
| CAZyme | C58_contig_197 | C58_contig_197_3325 | 3493996 | 3496638 | - | GH38 |
| TF | C58_contig_197 | C58_contig_197_3326 | 3496973 | 3498916 | + | HTH_11 | Mga |
| pfam | C58_contig_197 | C58_contig_197_3327 | 3498981 | 3499349 | + | DUF4440 |
| TC | C58_contig_197 | C58_contig_197_3328 | 3499447 | 3501222 | - | 3.A.1.106.2 |
Gene ID: C58_contig_197_3322
Type: TC
Location: 3492162 - 3492605 (-)
Type: TC
Location: 3492162 - 3492605 (-)
Gene ID: C58_contig_197_3323
Type: TC
Location: 3492609 - 3493646 (-)
Type: TC
Location: 3492609 - 3493646 (-)
Gene ID: C58_contig_197_3324
Type: TC
Location: 3493667 - 3493981 (-)
Type: TC
Location: 3493667 - 3493981 (-)
Gene ID: C58_contig_197_3325
Type: CAZyme
Location: 3493996 - 3496638 (-)
Type: CAZyme
Location: 3493996 - 3496638 (-)
Gene ID: C58_contig_197_3326
Type: TF
Location: 3496973 - 3498916 (+)
Type: TF
Location: 3496973 - 3498916 (+)
Gene ID: C58_contig_197_3327
Type: pfam
Location: 3498981 - 3499349 (+)
Type: pfam
Location: 3498981 - 3499349 (+)
Gene ID: C58_contig_197_3328
Type: TC
Location: 3499447 - 3501222 (-)
Type: TC
Location: 3499447 - 3501222 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Clostridium_AQ
Species
Clostridium_AQ innocuum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.