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Cluster: C58.bin_1_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C58_contig_270 C58_contig_270_224 222674 223384 + 3.A.1.147.8
NULL(UNKNOWN) C58_contig_270 C58_contig_270_225 223374 224966 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) C58_contig_270 C58_contig_270_226 225532 226863 + NULL(UNKNOWN)
[View Structural Homologs]
TC C58_contig_270 C58_contig_270_227 227234 229744 + 3.A.1.134.4
TF C58_contig_270 C58_contig_270_228 230229 230666 - MarR
pfam C58_contig_270 C58_contig_270_229 230884 231723 + PRD | PRD | CAT_RBD
TC C58_contig_270 C58_contig_270_230 231859 233709 + 4.A.1.2.11
CAZyme C58_contig_270 C58_contig_270_231 233721 235160 + GH1
pfam C58_contig_270 C58_contig_270_232 235142 235417 + ABM
TC C58_contig_270 C58_contig_270_233 235569 236888 + 2.A.66.1.32
TC C58_contig_270 C58_contig_270_234 237673 238500 + 3.A.1.28.2
TC C58_contig_270 C58_contig_270_235 238476 239336 + 3.A.1.26.7
TC C58_contig_270 C58_contig_270_236 239329 240129 + 3.A.1.25.4
pfam C58_contig_270 C58_contig_270_237 240122 240880 + PseudoU_synth_1 | PseudoU_synth_1
TC C58_contig_270 C58_contig_270_238 241147 242550 + 2.A.23.1.4
Gene ID: C58_contig_270_224
Type: TC
Location: 222674 - 223384 (+)
Gene ID: C58_contig_270_225
Type:
Location: 223374 - 224966 (+)
Gene ID: C58_contig_270_226
Type:
Location: 225532 - 226863 (+)
Gene ID: C58_contig_270_227
Type: TC
Location: 227234 - 229744 (+)
Gene ID: C58_contig_270_228
Type: TF
Location: 230229 - 230666 (-)
Gene ID: C58_contig_270_229
Type: pfam
Location: 230884 - 231723 (+)
Gene ID: C58_contig_270_230
Type: TC
Location: 231859 - 233709 (+)
Gene ID: C58_contig_270_231
Type: CAZyme
Location: 233721 - 235160 (+)
Gene ID: C58_contig_270_232
Type: pfam
Location: 235142 - 235417 (+)
Gene ID: C58_contig_270_233
Type: TC
Location: 235569 - 236888 (+)
Gene ID: C58_contig_270_234
Type: TC
Location: 237673 - 238500 (+)
Gene ID: C58_contig_270_235
Type: TC
Location: 238476 - 239336 (+)
Gene ID: C58_contig_270_236
Type: TC
Location: 239329 - 240129 (+)
Gene ID: C58_contig_270_237
Type: pfam
Location: 240122 - 240880 (+)
Gene ID: C58_contig_270_238
Type: TC
Location: 241147 - 242550 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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