Cluster: C58.bin_1_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: C58.bin_1
- CGC Family ID: CGCFAM_02423
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C58_contig_197 | C58_contig_197_2969 | 3134396 | 3135769 | - | GH1 |
| TF | C58_contig_197 | C58_contig_197_2970 | 3136002 | 3136805 | - | HTH_6 |
| CAZyme | C58_contig_197 | C58_contig_197_2971 | 3136838 | 3139447 | - | GH38 |
| TC | C58_contig_197 | C58_contig_197_2972 | 3139461 | 3139913 | - | 4.A.2.1.10 |
| TC | C58_contig_197 | C58_contig_197_2973 | 3139926 | 3141398 | - | 4.A.2.1.6 |
| TC | C58_contig_197 | C58_contig_197_2974 | 3141852 | 3143876 | - | 3.A.16.1.1 |
Gene ID: C58_contig_197_2969
Type: CAZyme
Location: 3134396 - 3135769 (-)
Type: CAZyme
Location: 3134396 - 3135769 (-)
Gene ID: C58_contig_197_2970
Type: TF
Location: 3136002 - 3136805 (-)
Type: TF
Location: 3136002 - 3136805 (-)
Gene ID: C58_contig_197_2971
Type: CAZyme
Location: 3136838 - 3139447 (-)
Type: CAZyme
Location: 3136838 - 3139447 (-)
Gene ID: C58_contig_197_2972
Type: TC
Location: 3139461 - 3139913 (-)
Type: TC
Location: 3139461 - 3139913 (-)
Gene ID: C58_contig_197_2973
Type: TC
Location: 3139926 - 3141398 (-)
Type: TC
Location: 3139926 - 3141398 (-)
Gene ID: C58_contig_197_2974
Type: TC
Location: 3141852 - 3143876 (-)
Type: TC
Location: 3141852 - 3143876 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Clostridium_AQ
Species
Clostridium_AQ innocuum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.