Cluster: C58.bin_1_CGC28
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: C58.bin_1
- CGC Family ID: CGCFAM_00284
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C58_contig_197 | C58_contig_197_2855 | 3005032 | 3006489 | - | 2.A.66.2.16 |
| pfam | C58_contig_197 | C58_contig_197_2856 | 3006482 | 3007582 | - | Amino_oxidase | GLF | NAD_binding_8 |
| CAZyme | C58_contig_197 | C58_contig_197_2857 | 3007592 | 3008545 | - | GT2 |
| CAZyme | C58_contig_197 | C58_contig_197_2858 | 3008538 | 3009440 | - | GT2 |
| CAZyme | C58_contig_197 | C58_contig_197_2859 | 3009433 | 3010581 | - | GT4 |
| NULL(UNKNOWN) | C58_contig_197 | C58_contig_197_2860 | 3010600 | 3011721 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C58_contig_197 | C58_contig_197_2861 | 3011714 | 3012541 | - | GT2 |
| CAZyme | C58_contig_197 | C58_contig_197_2862 | 3012525 | 3013676 | - | GT4 |
| pfam | C58_contig_197 | C58_contig_197_2863 | 3013690 | 3014316 | - | PglD_N |
| TC | C58_contig_197 | C58_contig_197_2864 | 3014332 | 3014931 | - | 9.B.18.1.2 |
| pfam | C58_contig_197 | C58_contig_197_2865 | 3014931 | 3016157 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 |
| pfam | C58_contig_197 | C58_contig_197_2866 | 3016191 | 3016703 | - | NusG |
| TC | C58_contig_197 | C58_contig_197_2867 | 3017051 | 3018946 | - | 9.B.18.2.1 |
Gene ID: C58_contig_197_2855
Type: TC
Location: 3005032 - 3006489 (-)
Type: TC
Location: 3005032 - 3006489 (-)
Gene ID: C58_contig_197_2856
Type: pfam
Location: 3006482 - 3007582 (-)
Type: pfam
Location: 3006482 - 3007582 (-)
Gene ID: C58_contig_197_2857
Type: CAZyme
Location: 3007592 - 3008545 (-)
Type: CAZyme
Location: 3007592 - 3008545 (-)
Gene ID: C58_contig_197_2858
Type: CAZyme
Location: 3008538 - 3009440 (-)
Type: CAZyme
Location: 3008538 - 3009440 (-)
Gene ID: C58_contig_197_2859
Type: CAZyme
Location: 3009433 - 3010581 (-)
Type: CAZyme
Location: 3009433 - 3010581 (-)
Gene ID: C58_contig_197_2860
Type:
Location: 3010600 - 3011721 (-)
Type:
Location: 3010600 - 3011721 (-)
Gene ID: C58_contig_197_2861
Type: CAZyme
Location: 3011714 - 3012541 (-)
Type: CAZyme
Location: 3011714 - 3012541 (-)
Gene ID: C58_contig_197_2862
Type: CAZyme
Location: 3012525 - 3013676 (-)
Type: CAZyme
Location: 3012525 - 3013676 (-)
Gene ID: C58_contig_197_2863
Type: pfam
Location: 3013690 - 3014316 (-)
Type: pfam
Location: 3013690 - 3014316 (-)
Gene ID: C58_contig_197_2864
Type: TC
Location: 3014332 - 3014931 (-)
Type: TC
Location: 3014332 - 3014931 (-)
Gene ID: C58_contig_197_2865
Type: pfam
Location: 3014931 - 3016157 (-)
Type: pfam
Location: 3014931 - 3016157 (-)
Gene ID: C58_contig_197_2866
Type: pfam
Location: 3016191 - 3016703 (-)
Type: pfam
Location: 3016191 - 3016703 (-)
Gene ID: C58_contig_197_2867
Type: TC
Location: 3017051 - 3018946 (-)
Type: TC
Location: 3017051 - 3018946 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Clostridium_AQ
Species
Clostridium_AQ innocuum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.