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Cluster: C58.bin_1_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C58_contig_197 C58_contig_197_2481 2606994 2607869 + GT14
NULL(UNKNOWN) C58_contig_197 C58_contig_197_2482 2608086 2608607 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) C58_contig_197 C58_contig_197_2483 2608776 2609087 - NULL(UNKNOWN)
[View Structural Homologs]
TC C58_contig_197 C58_contig_197_2484 2609161 2610051 - 4.A.6.1.6
pfam C58_contig_197 C58_contig_197_2485 2610054 2610893 - EII-Sor
TC C58_contig_197 C58_contig_197_2486 2610958 2611449 - 4.A.6.1.9
TC C58_contig_197 C58_contig_197_2487 2611483 2611911 - 4.A.6.1.11
Gene ID: C58_contig_197_2481
Type: CAZyme
Location: 2606994 - 2607869 (+)
Gene ID: C58_contig_197_2482
Type:
Location: 2608086 - 2608607 (+)
Gene ID: C58_contig_197_2483
Type:
Location: 2608776 - 2609087 (-)
Gene ID: C58_contig_197_2484
Type: TC
Location: 2609161 - 2610051 (-)
Gene ID: C58_contig_197_2485
Type: pfam
Location: 2610054 - 2610893 (-)
Gene ID: C58_contig_197_2486
Type: TC
Location: 2610958 - 2611449 (-)
Gene ID: C58_contig_197_2487
Type: TC
Location: 2611483 - 2611911 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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