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Cluster: C58.bin_1_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C58_contig_197 C58_contig_197_1739 1826599 1827912 - CE4
sulfatase C58_contig_197 C58_contig_197_1740 1828040 1829875 + S1_97
NULL(UNKNOWN) C58_contig_197 C58_contig_197_1741 1830335 1830727 - NULL(UNKNOWN)
[View Structural Homologs]
TC C58_contig_197 C58_contig_197_1742 1831288 1831902 + 2.A.87.1.2
pfam C58_contig_197 C58_contig_197_1743 1832011 1832490 - Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10
TC C58_contig_197 C58_contig_197_1744 1832562 1833287 - 3.A.1.17.5
pfam C58_contig_197 C58_contig_197_1745 1833284 1833892 - SRAP
STP C58_contig_197 C58_contig_197_1746 1833910 1835415 - TPR_2
TC C58_contig_197 C58_contig_197_1747 1835486 1836331 - 2.A.119.2.1
Gene ID: C58_contig_197_1739
Type: CAZyme
Location: 1826599 - 1827912 (-)
Gene ID: C58_contig_197_1740
Type: sulfatase
Location: 1828040 - 1829875 (+)
Gene ID: C58_contig_197_1741
Type:
Location: 1830335 - 1830727 (-)
Gene ID: C58_contig_197_1742
Type: TC
Location: 1831288 - 1831902 (+)
Gene ID: C58_contig_197_1743
Type: pfam
Location: 1832011 - 1832490 (-)
Gene ID: C58_contig_197_1744
Type: TC
Location: 1832562 - 1833287 (-)
Gene ID: C58_contig_197_1745
Type: pfam
Location: 1833284 - 1833892 (-)
Gene ID: C58_contig_197_1746
Type: STP
Location: 1833910 - 1835415 (-)
Gene ID: C58_contig_197_1747
Type: TC
Location: 1835486 - 1836331 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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