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Cluster: C58.bin_1_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C58_contig_270 C58_contig_270_40 35954 36943 + 3.A.1.34.1
TC C58_contig_270 C58_contig_270_41 37203 38075 + 3.A.1.34.1
TC C58_contig_270 C58_contig_270_42 38068 38823 + 3.A.1.34.1
pfam C58_contig_270 C58_contig_270_43 39107 40243 + NTP_transferase | Hexapep_GlmU
pfam C58_contig_270 C58_contig_270_44 40245 41360 + NTP_transferase | Hexapep_GlmU
CAZyme C58_contig_270 C58_contig_270_45 41360 42799 + GT5
TC C58_contig_270 C58_contig_270_46 43172 43675 + 4.A.6.1.5
STP C58_contig_270 C58_contig_270_47 43732 46464 + AAA
TC C58_contig_270 C58_contig_270_48 46539 47006 + 4.A.6.1.5
TC C58_contig_270 C58_contig_270_49 47035 47838 + 4.A.6.1.5
TC C58_contig_270 C58_contig_270_50 47825 48622 + 4.A.6.1.5
Gene ID: C58_contig_270_40
Type: TC
Location: 35954 - 36943 (+)
Gene ID: C58_contig_270_41
Type: TC
Location: 37203 - 38075 (+)
Gene ID: C58_contig_270_42
Type: TC
Location: 38068 - 38823 (+)
Gene ID: C58_contig_270_43
Type: pfam
Location: 39107 - 40243 (+)
Gene ID: C58_contig_270_44
Type: pfam
Location: 40245 - 41360 (+)
Gene ID: C58_contig_270_45
Type: CAZyme
Location: 41360 - 42799 (+)
Gene ID: C58_contig_270_46
Type: TC
Location: 43172 - 43675 (+)
Gene ID: C58_contig_270_47
Type: STP
Location: 43732 - 46464 (+)
Gene ID: C58_contig_270_48
Type: TC
Location: 46539 - 47006 (+)
Gene ID: C58_contig_270_49
Type: TC
Location: 47035 - 47838 (+)
Gene ID: C58_contig_270_50
Type: TC
Location: 47825 - 48622 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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