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Cluster: C57.bin_3_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C57_contig_1762 C57_contig_1762_459 590553 593024 - 9.B.144.1.4
pfam C57_contig_1762 C57_contig_1762_460 593148 594632 + Polysacc_synt
CAZyme C57_contig_1762 C57_contig_1762_461 594629 595633 + GT2
CAZyme C57_contig_1762 C57_contig_1762_462 595639 596742 + GT4
CAZyme C57_contig_1762 C57_contig_1762_463 596739 597926 - GT4
CAZyme C57_contig_1762 C57_contig_1762_464 597943 598980 - GT2
peptidase C57_contig_1762 C57_contig_1762_465 598992 600920 - C44.UNW
pfam C57_contig_1762 C57_contig_1762_466 600968 601948 - C5-epim_C
CAZyme C57_contig_1762 C57_contig_1762_467 601962 603278 - GT4
Gene ID: C57_contig_1762_459
Type: TC
Location: 590553 - 593024 (-)
Gene ID: C57_contig_1762_460
Type: pfam
Location: 593148 - 594632 (+)
Gene ID: C57_contig_1762_461
Type: CAZyme
Location: 594629 - 595633 (+)
Gene ID: C57_contig_1762_462
Type: CAZyme
Location: 595639 - 596742 (+)
Gene ID: C57_contig_1762_463
Type: CAZyme
Location: 596739 - 597926 (-)
Gene ID: C57_contig_1762_464
Type: CAZyme
Location: 597943 - 598980 (-)
Gene ID: C57_contig_1762_465
Type: peptidase
Location: 598992 - 600920 (-)
Gene ID: C57_contig_1762_466
Type: pfam
Location: 600968 - 601948 (-)
Gene ID: C57_contig_1762_467
Type: CAZyme
Location: 601962 - 603278 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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