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Cluster: C57.bin_3_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C57_contig_6584 C57_contig_6584_153 135530 136177 + 2.A.21.9.1
TC C57_contig_6584 C57_contig_6584_154 136919 138832 - 1.A.33.1.2
pfam C57_contig_6584 C57_contig_6584_155 139146 142181 + TPR_8 | TPR_16 | TPR_16
CAZyme C57_contig_6584 C57_contig_6584_156 142193 142930 + GT2
Gene ID: C57_contig_6584_153
Type: TC
Location: 135530 - 136177 (+)
Gene ID: C57_contig_6584_154
Type: TC
Location: 136919 - 138832 (-)
Gene ID: C57_contig_6584_155
Type: pfam
Location: 139146 - 142181 (+)
Gene ID: C57_contig_6584_156
Type: CAZyme
Location: 142193 - 142930 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C57_contig_6584_153 vegetarian > vegan 1.18165 0.01185

🧭 Explore Read Mapping of CGC

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