dbCAN Logo

Cluster: C55.CMAG_2_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C55_contig_1093 C55_contig_1093_660 676681 678663 - CBM61 | GH53
CAZyme C55_contig_1093 C55_contig_1093_661 678788 680833 - GH42
TC C55_contig_1093 C55_contig_1093_662 680848 681708 - 3.A.1.1.2
TC C55_contig_1093 C55_contig_1093_663 681710 682996 - 3.A.1.1.2
TC C55_contig_1093 C55_contig_1093_664 683038 684306 - 3.A.1.1.2
TF C55_contig_1093 C55_contig_1093_665 684514 685512 + LacI
TC C55_contig_1093 C55_contig_1093_666 685720 686187 - 2.A.79.1.6
TC C55_contig_1093 C55_contig_1093_667 686187 686975 - 2.A.79.1.5
Gene ID: C55_contig_1093_660
Type: CAZyme
Location: 676681 - 678663 (-)
Gene ID: C55_contig_1093_661
Type: CAZyme
Location: 678788 - 680833 (-)
Gene ID: C55_contig_1093_662
Type: TC
Location: 680848 - 681708 (-)
Gene ID: C55_contig_1093_663
Type: TC
Location: 681710 - 682996 (-)
Gene ID: C55_contig_1093_664
Type: TC
Location: 683038 - 684306 (-)
Gene ID: C55_contig_1093_665
Type: TF
Location: 684514 - 685512 (+)
Gene ID: C55_contig_1093_666
Type: TC
Location: 685720 - 686187 (-)
Gene ID: C55_contig_1093_667
Type: TC
Location: 686187 - 686975 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C55_contig_1093_662 vegan > omnivore 2.66323 0.00574
C55_contig_1093_667 vegetarian > omnivore 1.49891 0.02011

🧭 Explore Read Mapping of CGC

← Back to Cluster List