Cluster: C55.CMAG_2_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C55.CMAG_2
- CGC Family ID: CGCFAM_00956
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C55_contig_1093 | C55_contig_1093_585 | 581282 | 582262 | - | GH73 |
| TC | C55_contig_1093 | C55_contig_1093_586 | 582394 | 583446 | - | 3.A.1.11.7 |
| TC | C55_contig_1093 | C55_contig_1093_587 | 583446 | 584120 | - | 3.A.1.11.8 |
| TC | C55_contig_1093 | C55_contig_1093_588 | 584225 | 585061 | - | 3.A.1.11.1 |
| TC | C55_contig_1093 | C55_contig_1093_589 | 585063 | 586106 | - | 3.A.1.11.8 |
Gene ID: C55_contig_1093_585
Type: CAZyme
Location: 581282 - 582262 (-)
Type: CAZyme
Location: 581282 - 582262 (-)
Gene ID: C55_contig_1093_586
Type: TC
Location: 582394 - 583446 (-)
Type: TC
Location: 582394 - 583446 (-)
Gene ID: C55_contig_1093_587
Type: TC
Location: 583446 - 584120 (-)
Type: TC
Location: 583446 - 584120 (-)
Gene ID: C55_contig_1093_588
Type: TC
Location: 584225 - 585061 (-)
Type: TC
Location: 584225 - 585061 (-)
Gene ID: C55_contig_1093_589
Type: TC
Location: 585063 - 586106 (-)
Type: TC
Location: 585063 - 586106 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Romboutsia
Species
Romboutsia timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C55_contig_1093_589 | vegan > omnivore | 4.25401 | 0.00574 |
| C55_contig_1093_589 | vegetarian > omnivore | 3.96055 | 0.02011 |