Cluster: C55.CMAG_2_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C55.CMAG_2
- CGC Family ID: CGCFAM_01660
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C55_contig_1093 | C55_contig_1093_300 | 294499 | 296802 | - | GH65 |
| pfam | C55_contig_1093 | C55_contig_1093_301 | 296824 | 297483 | - | Hydrolase | HAD_2 |
| TF | C55_contig_1093 | C55_contig_1093_302 | 297531 | 298532 | - | LacI |
| TC | C55_contig_1093 | C55_contig_1093_303 | 298663 | 299481 | - | 3.A.1.1.45 |
| TC | C55_contig_1093 | C55_contig_1093_304 | 299481 | 300410 | - | 3.A.1.1.45 |
| TC | C55_contig_1093 | C55_contig_1093_305 | 300478 | 301797 | - | 3.A.1.1.45 |
Gene ID: C55_contig_1093_300
Type: CAZyme
Location: 294499 - 296802 (-)
Type: CAZyme
Location: 294499 - 296802 (-)
Gene ID: C55_contig_1093_301
Type: pfam
Location: 296824 - 297483 (-)
Type: pfam
Location: 296824 - 297483 (-)
Gene ID: C55_contig_1093_302
Type: TF
Location: 297531 - 298532 (-)
Type: TF
Location: 297531 - 298532 (-)
Gene ID: C55_contig_1093_303
Type: TC
Location: 298663 - 299481 (-)
Type: TC
Location: 298663 - 299481 (-)
Gene ID: C55_contig_1093_304
Type: TC
Location: 299481 - 300410 (-)
Type: TC
Location: 299481 - 300410 (-)
Gene ID: C55_contig_1093_305
Type: TC
Location: 300478 - 301797 (-)
Type: TC
Location: 300478 - 301797 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Romboutsia
Species
Romboutsia timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.