Cluster: C55.CMAG_2_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: C55.CMAG_2
- CGC Family ID: CGCFAM_01807
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C55_contig_1093 | C55_contig_1093_2708 | 2840287 | 2842476 | - | GH36 |
| TF | C55_contig_1093 | C55_contig_1093_2709 | 2842619 | 2843482 | + | HTH_AraC | HTH_AraC |
| TC | C55_contig_1093 | C55_contig_1093_2710 | 2843583 | 2844956 | - | 2.A.2.1.1 |
| STP | C55_contig_1093 | C55_contig_1093_2711 | 2845350 | 2846306 | + | PfkB |
| CAZyme | C55_contig_1093 | C55_contig_1093_2712 | 2846325 | 2847794 | + | GH13_18 |
Gene ID: C55_contig_1093_2708
Type: CAZyme
Location: 2840287 - 2842476 (-)
Type: CAZyme
Location: 2840287 - 2842476 (-)
Gene ID: C55_contig_1093_2709
Type: TF
Location: 2842619 - 2843482 (+)
Type: TF
Location: 2842619 - 2843482 (+)
Gene ID: C55_contig_1093_2710
Type: TC
Location: 2843583 - 2844956 (-)
Type: TC
Location: 2843583 - 2844956 (-)
Gene ID: C55_contig_1093_2711
Type: STP
Location: 2845350 - 2846306 (+)
Type: STP
Location: 2845350 - 2846306 (+)
Gene ID: C55_contig_1093_2712
Type: CAZyme
Location: 2846325 - 2847794 (+)
Type: CAZyme
Location: 2846325 - 2847794 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Romboutsia
Species
Romboutsia timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.