Cluster: C55.CMAG_2_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: C55.CMAG_2
- CGC Family ID: CGCFAM_00817
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C55_contig_1093 | C55_contig_1093_250 | 241292 | 242785 | - | GH32 |
| TC | C55_contig_1093 | C55_contig_1093_251 | 242810 | 243652 | - | 3.A.1.1.20 |
| TC | C55_contig_1093 | C55_contig_1093_252 | 243666 | 244592 | - | 3.A.1.1.20 |
| STP | C55_contig_1093 | C55_contig_1093_253 | 244706 | 245995 | - | SBP_bac_1 |
| TF | C55_contig_1093 | C55_contig_1093_254 | 246489 | 247466 | - | LacI |
| CAZyme | C55_contig_1093 | C55_contig_1093_255 | 247711 | 248430 | - | GT51 |
Gene ID: C55_contig_1093_250
Type: CAZyme
Location: 241292 - 242785 (-)
Type: CAZyme
Location: 241292 - 242785 (-)
Gene ID: C55_contig_1093_251
Type: TC
Location: 242810 - 243652 (-)
Type: TC
Location: 242810 - 243652 (-)
Gene ID: C55_contig_1093_252
Type: TC
Location: 243666 - 244592 (-)
Type: TC
Location: 243666 - 244592 (-)
Gene ID: C55_contig_1093_253
Type: STP
Location: 244706 - 245995 (-)
Type: STP
Location: 244706 - 245995 (-)
Gene ID: C55_contig_1093_254
Type: TF
Location: 246489 - 247466 (-)
Type: TF
Location: 246489 - 247466 (-)
Gene ID: C55_contig_1093_255
Type: CAZyme
Location: 247711 - 248430 (-)
Type: CAZyme
Location: 247711 - 248430 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Romboutsia
Species
Romboutsia timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.