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Cluster: C55.CMAG_2_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C55_contig_1093 C55_contig_1093_2495 2622042 2622929 - GT2
pfam C55_contig_1093 C55_contig_1093_2496 2623329 2624042 + Glycos_transf_2
pfam C55_contig_1093 C55_contig_1093_2497 2625123 2625509 - DUF772
TC C55_contig_1093 C55_contig_1093_2498 2625608 2627008 - 2.A.23.1.8
NULL(UNKNOWN) C55_contig_1093 C55_contig_1093_2499 2627192 2627611 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme C55_contig_1093 C55_contig_1093_2500 2627697 2628455 - CE4
CAZyme C55_contig_1093 C55_contig_1093_2501 2628882 2630537 - GH13_31
Gene ID: C55_contig_1093_2495
Type: CAZyme
Location: 2622042 - 2622929 (-)
Gene ID: C55_contig_1093_2496
Type: pfam
Location: 2623329 - 2624042 (+)
Gene ID: C55_contig_1093_2497
Type: pfam
Location: 2625123 - 2625509 (-)
Gene ID: C55_contig_1093_2498
Type: TC
Location: 2625608 - 2627008 (-)
Gene ID: C55_contig_1093_2499
Type:
Location: 2627192 - 2627611 (-)
Gene ID: C55_contig_1093_2500
Type: CAZyme
Location: 2627697 - 2628455 (-)
Gene ID: C55_contig_1093_2501
Type: CAZyme
Location: 2628882 - 2630537 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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