Cluster: C55.CMAG_2_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C55.CMAG_2
- CGC Family ID: CGCFAM_00027
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C55_contig_1093 | C55_contig_1093_2367 | 2496450 | 2497589 | + | 2.A.86.1.8 |
| NULL(UNKNOWN) | C55_contig_1093 | C55_contig_1093_2368 | 2497674 | 2498039 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C55_contig_1093 | C55_contig_1093_2369 | 2498623 | 2500011 | + | 4.A.1.2.11 |
| CAZyme | C55_contig_1093 | C55_contig_1093_2370 | 2500037 | 2501443 | + | GH1 |
Gene ID: C55_contig_1093_2367
Type: TC
Location: 2496450 - 2497589 (+)
Type: TC
Location: 2496450 - 2497589 (+)
Gene ID: C55_contig_1093_2368
Type:
Location: 2497674 - 2498039 (+)
Type:
Location: 2497674 - 2498039 (+)
Gene ID: C55_contig_1093_2369
Type: TC
Location: 2498623 - 2500011 (+)
Type: TC
Location: 2498623 - 2500011 (+)
Gene ID: C55_contig_1093_2370
Type: CAZyme
Location: 2500037 - 2501443 (+)
Type: CAZyme
Location: 2500037 - 2501443 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Romboutsia
Species
Romboutsia timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C55_contig_1093_2368 | vegan > omnivore | 2.01566 | 0.00574 |
| C55_contig_1093_2368 | vegetarian > omnivore | 1.50456 | 0.02011 |