Cluster: C55.CMAG_2_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: C55.CMAG_2
- CGC Family ID: CGCFAM_00650
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C55_contig_1093 | C55_contig_1093_2329 | 2449080 | 2450216 | + | CE9 |
| pfam | C55_contig_1093 | C55_contig_1093_2330 | 2450232 | 2450981 | + | Glucosamine_iso |
| TC | C55_contig_1093 | C55_contig_1093_2331 | 2451346 | 2453088 | + | 3.A.1.121.2 |
Gene ID: C55_contig_1093_2329
Type: CAZyme
Location: 2449080 - 2450216 (+)
Type: CAZyme
Location: 2449080 - 2450216 (+)
Gene ID: C55_contig_1093_2330
Type: pfam
Location: 2450232 - 2450981 (+)
Type: pfam
Location: 2450232 - 2450981 (+)
Gene ID: C55_contig_1093_2331
Type: TC
Location: 2451346 - 2453088 (+)
Type: TC
Location: 2451346 - 2453088 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Romboutsia
Species
Romboutsia timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C55_contig_1093_2330 | vegan > omnivore | 4.67651 | 0.00574 |
| C55_contig_1093_2330 | vegetarian > omnivore | 1.89787 | 0.02011 |