Cluster: C55.CMAG_2_CGC22
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: C55.CMAG_2
- CGC Family ID: CGCFAM_02740
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C55_contig_1093 | C55_contig_1093_1975 | 2076930 | 2077877 | + | CE4 |
| STP | C55_contig_1093 | C55_contig_1093_1976 | 2078238 | 2078450 | + | FeoA |
| TC | C55_contig_1093 | C55_contig_1093_1977 | 2078470 | 2080446 | + | 9.A.8.1.9 |
Gene ID: C55_contig_1093_1975
Type: CAZyme
Location: 2076930 - 2077877 (+)
Type: CAZyme
Location: 2076930 - 2077877 (+)
Gene ID: C55_contig_1093_1976
Type: STP
Location: 2078238 - 2078450 (+)
Type: STP
Location: 2078238 - 2078450 (+)
Gene ID: C55_contig_1093_1977
Type: TC
Location: 2078470 - 2080446 (+)
Type: TC
Location: 2078470 - 2080446 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Romboutsia
Species
Romboutsia timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C55_contig_1093_1976 | vegan > omnivore | 2.16434 | 0.00574 |
| C55_contig_1093_1976 | vegetarian > omnivore | 2.16246 | 0.02011 |