dbCAN HGM

Cluster: C55.CMAG_2_CGC20

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	C55_contig_1093	C55_contig_1093_1923	2030191	2030871	+	8.A.3.2.4
TC	C55_contig_1093	C55_contig_1093_1924	2030882	2031592	+	8.A.3.2.1
TC	C55_contig_1093	C55_contig_1093_1925	2031611	2032267	+	9.B.18.1.3
CAZyme	C55_contig_1093	C55_contig_1093_1926	2032279	2033070	+	GT2
pfam	C55_contig_1093	C55_contig_1093_1927	2033457	2034236	+	Glycos_transf_2
CAZyme	C55_contig_1093	C55_contig_1093_1928	2034280	2035191	+	GT2
pfam	C55_contig_1093	C55_contig_1093_1929	2035249	2036427	+	Wzy_C
pfam	C55_contig_1093	C55_contig_1093_1930	2036457	2037623	+	UDPG_MGDP_dh \| UDPG_MGDP_dh_C \| UDPG_MGDP_dh_N
TC	C55_contig_1093	C55_contig_1093_1931	2037652	2039112	+	2.A.66.2.16

Gene ID: C55_contig_1093_1923
Type: TC
Location: 2030191 - 2030871 (+)

Gene ID: C55_contig_1093_1924
Type: TC
Location: 2030882 - 2031592 (+)

Gene ID: C55_contig_1093_1925
Type: TC
Location: 2031611 - 2032267 (+)

Gene ID: C55_contig_1093_1926
Type: CAZyme
Location: 2032279 - 2033070 (+)

Gene ID: C55_contig_1093_1927
Type: pfam
Location: 2033457 - 2034236 (+)

Gene ID: C55_contig_1093_1928
Type: CAZyme
Location: 2034280 - 2035191 (+)

Gene ID: C55_contig_1093_1929
Type: pfam
Location: 2035249 - 2036427 (+)

Gene ID: C55_contig_1093_1930
Type: pfam
Location: 2036457 - 2037623 (+)

Gene ID: C55_contig_1093_1931
Type: TC
Location: 2037652 - 2039112 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.