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Cluster: C55.CMAG_2_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C55_contig_1093 C55_contig_1093_1852 1963486 1963848 + 1.E.14.1.1
TC C55_contig_1093 C55_contig_1093_1853 1963851 1964540 + 2.A.122.1.5
TC C55_contig_1093 C55_contig_1093_1854 1965021 1965887 + 2.A.115.1.2
pfam C55_contig_1093 C55_contig_1093_1855 1966214 1967011 + MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN
pfam C55_contig_1093 C55_contig_1093_1856 1967185 1968156 + CAP | CAP_assoc_N
CAZyme C55_contig_1093 C55_contig_1093_1857 1968182 1968877 + CE4
Gene ID: C55_contig_1093_1852
Type: TC
Location: 1963486 - 1963848 (+)
Gene ID: C55_contig_1093_1853
Type: TC
Location: 1963851 - 1964540 (+)
Gene ID: C55_contig_1093_1854
Type: TC
Location: 1965021 - 1965887 (+)
Gene ID: C55_contig_1093_1855
Type: pfam
Location: 1966214 - 1967011 (+)
Gene ID: C55_contig_1093_1856
Type: pfam
Location: 1967185 - 1968156 (+)
Gene ID: C55_contig_1093_1857
Type: CAZyme
Location: 1968182 - 1968877 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C55_contig_1093_1855 vegan > omnivore 2.33561 0.00574
C55_contig_1093_1855 vegetarian > omnivore 2.11543 0.02011

🧭 Explore Read Mapping of CGC

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